Using RepeatMasker to Identify Repetitive Elements in Genomic Sequences

By M. Tarailo-Graovac, Nansheng Chen. Current Protocols in Bioinformatics, 2009

2,666 citations recorded by the source corpus.

Subfields: Molecular Biology, Plant Science

View Paper: https://www.semanticscholar.org/paper/86ac97c760297131d3525fee64dfa434a9c82113

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In Molecular Biology

1. Xun Xu
2. Jun Wang

Citations in the corpus

• Genome sequence of the cultivated cotton Gossypium arboreum (2014, positive): “The homology-based approach involved applying commonly used databases of known repetitive sequences along with such programs as RepeatProteinMask and RepeatMasker 42 .”
• Predicting Genes in Single Genomes with AUGUSTUS (2018, neutral): “RepeatMasker (usage is described in Chen, 2004) is a good starting point.”