A gene expression atlas of the model legume Medicago truncatula.

By Vagner A. Benedito, I. Torres-Jerez, Jeremy D. Murray, Andry Andriankaja, S. Allen, Klementina Kakar, M. Wandrey, J. Verdier, Hélène Zuber, T. Ott and 9 more. The Plant Journal, 2008

703 citations recorded by the source corpus.

Subfields: Agronomy and Crop Science, Plant Science

View Paper: https://www.semanticscholar.org/paper/8439e91f0223d27a4a286e2d73f183f118f31ff5

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Citations in the corpus

Achievements and Challenges in Improving Temperate Perennial Forage Legumes (2015, background): “truncatula by evaluating various organs at different developmental stages (Benedito et al., 2008), particularly for genes related to symbiosis (El Yahyaoui et al.”
Comprehending crystalline β-carotene accumulation by comparing engineered cell models and the natural carotenoid-rich system of citrus (2011, neutral): “seeds containing seed coat, endosperm, and embryo) (Benedito et al., 2008), and the other corresponding to a spatial expression study revealing probe sets expressed specifically in the seed coat (Pang et al.”
Translational Genomics in Agriculture: Some Examples in Grain Legumes (2015, methodology): “In the case of legumes, the M. truncatula Gene Expression Atlas (MtGEA) was developed covering a range of tissues such as roots, nodules, stems, petioles, leaves, vegetative buds, flowers, seeds and seed pods with detailed developmental time-series for nodules and seeds, using the Affymetrix GeneChi”
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome (2010, methodology): “Although a log2-transformation can significantly reduce the dynamic range, a hierarchical clustering on log2-transformed data [11,16,17] has the potential to miss genes with highly similar gene expression profiles but with significantly lower or higher gene expression at each tissue.”
Legumes in the reclamation of marginal soils, from cultivar and inoculant selection to transgenic approaches (2011, methodology): “A gene expression atlas of M. truncatula was obtained by comparative transcriptome analysis as a resource for legume functional genomics (Benedito et al. 2008), and gene expression was analyzed in the roots of M. truncatula subjected to salt stress (Merchan et al. 2007; Li et al. 2009).”