Multilocus sequence typing of bacteria.

By Martin C. J. Maiden. Annual Review of Microbiology, 2006

909 citations recorded by the source corpus.

Subfields: Food Science, Microbiology, Molecular Biology

View Paper: https://www.semanticscholar.org/paper/7f4597d871b69e8aca7ba5a103032c1158e02d5e

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Citations in the corpus

SRST2: Rapid genomic surveillance for public health and hospital microbiology labs (2014, methodology): “SRST2 can type reads using any sequence database(s) and can calculate combinatorial sequence types defined in MLST-style databases [3].”
Disease interaction and pathogens exchange between wild and farmed fish populations with special reference to Norway (2011, methodology): “Difference in gene sequence are used to define allelic profiles or sequence types and the relatedness among isolates is determined by comparing the sequences (Maiden, 2006).”
Ribosomal Multi-Locus Sequence Typing: universal characterisation of bacteria from domain to strain (2012, methodology): “The identification, indexing and curation of the rps genes across the domain described here represent a first step in an ongoing process, equivalent to that currently undertaken for MLST schemes (Maiden, 2006).”
BIGSdb: Scalable analysis of bacterial genome variation at the population level (2010, methodology): “One method that has been widely used to achieve this for both population studies and especially epidemiological investigation is multilocus sequence typing (MLST) [9,10].”
The Population Structure of Acinetobacter baumannii: Expanding Multiresistant Clones from an Ancestral Susceptible Genetic Pool (2010, background): “Rather than giving roman numerals or letters to novel widespread clones, we would recommend to follow the widely successful MLST-based naming system, which proved convenient for other bacterial species [21,22,55,56].”
Pseudomonas aeruginosa population structure revisited under environmental focus (2010, methodology): “On another hand, MLST and MLEE methods which use nucleotide sequence data of, mostly, seven housekeeping genes, are rather universal, portable and definitive methods for bacteria characterization (Maiden et al., 1998; Maiden, 2006).”