Analysis of one million base pairs of Neanderthal DNA

By R. Green, J. Krause, S. Ptak, Adrian W. Briggs, Michael T. Ronan, J. Simons, Lei Du, M. Egholm, Jonathan Rothberg, M. Paunović and 1 more. Nature, 2006

730 citations recorded by the source corpus.

Subfields: Ecology, Genetics, Molecular Biology

View Paper: https://www.semanticscholar.org/paper/74f63dfebef90dd0945180864435a7e162ae249c

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Citations in the corpus

High‐throughput DNA sequencing – concepts and limitations (2010, background): “Computational post-processing may correct for these artifacts [38].”
Schmutzi: estimation of contamination and endogenous mitochondrial consensus calling for ancient DNA (2015, methodology): “To date, methods to quantify present-day human mitochondrial contamination have relied on the presence of fixed differences between the mitochondrial genomes of archaic and modern humans [11, 12].”
Advances in molecular technology and their impact on fisheries genetics (2008, background): “Technologies producing such short reads are also useful for the analyses of degraded or ancient DNA, and have already yielded partial genomes of Neanderthal (Homo neanderthalensis, Hominidae; Green et al. 2006; Noonan et al. 2006) and complete mitochondrial genomes of mammoth (Mammuthus primigenius,”
From the field to the laboratory: Controlling DNA contamination in human ancient DNA research in the high-throughput sequencing era (2017, positive): “More importantly, DNA molecules from the environment ( e.g. soil matrix, storage facility) or from people who handle the samples can easily outcom-pete the small amounts of endogenous aDNA (Noonan et al. 2005; Green et al. 2006; Der Sarkissian et al. 2014).”
Testing for ancient admixture between closely related populations. (2011, background): “Green et al. (2010) developed a formal test for admixture based on the direct comparison of DNA sequences from Neandertals and modern human populations.”
Applications of next-generation sequencing technologies in functional genomics. (2008, background): “This review does not address genome sequencing and resequencing applications of next-generation sequencers [1] or the huge impact these technologies have had in metagenomics (reviewed in [2]).”
A Draft Sequence of the Neandertal Genome (2010, neutral): “Krause et al., Nature 449, 902 (2007). 6.”