Development and evaluation of a DNA-barcoding approach for the rapid identification of nematodes

By Punyasloke Bhadury, M. Austen, D. Bilton, P. Lambshead, Alex Rogers, G. Smerdon. 2006

163 citations recorded by the source corpus.

View Paper: https://www.semanticscholar.org/paper/7431df2f5f971182e4e8f566efe2bb7fd6a075c0

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Citations in the corpus

DNA Barcodes for Marine Biodiversity: Moving Fast Forward? (2010, background): “So far, the 18S gene was found to amplify across many taxa and with 97% identification success [79].”
Metagenetic analysis of patterns of distribution and diversity of marine meiobenthic eukaryotes (2014, background): “Global Ecology and Biogeography published by John Wiley & Sons Ltd 1298 nematodes are the most abundant metazoans in marine sediments (Lambshead, 2004; Bhadury et al., 2006), they are likely to directly affect community dynamics, assemblage patterns and ecological function (Danovaro et al., 2008).”
Integrative taxonomy in two free-living nematode species complexes (2008, background): “Genomewide information has proven to be powerful for the separation of nematode sibling species (De Ley, 2000; Derycke et al., 2005), potentially even allowing the development of a DNA barcoding approach in nematology (Blaxter et al., 2005; Bhadury et al., 2006).”
DNA barcoding reveals cryptic diversity in marine hydroids (Cnidaria, Hydrozoa) from coastal and deep‐sea environments (2007, background): “Markmann & Tautz 2005; Mathews 2006), especially where COI does not amplify reliably for the taxon under study (Cook et al. 2005; Bhadury et al. 2006), has failed to resolve species as a result of slow evolution of the mitochondrial genome (e.”
Barcoding diatoms: evaluation of the V4 subregion on the 18S rRNA gene, including new primers and protocols (2011, background): “…trnH-psbA, the 23S rRNA gene, the mitochondrial gene cox1, and the nuclear markers ITS, entire 18S (SSU) rRNA gene and 28S (LSU) rRNA gene (e.g. Bhadury et al. 2006; Fazekas et al. 2008; Hebert et al. 2004; Hollingsworth et al. 2009; Kress and Erickson 2007; Kress et al. 2005; Newmaster et al.…”
Disentangling taxonomy within the Rhabditis (Pellioditis) marina (Nematoda, Rhabditidae) species complex using molecular and morhological tools (2008, background): “Molecular techniques and phylogenetic analyses can potentially overcome this problem, and barcoding appears to be a promising tool to assess biodiversity in free-living nematodes (Floyd et al., 2002; Blaxter et al., 2005; Bhadury et al., 2006).”
DNA barcoding as a tool for coral reef conservation (2007, background): “For example, in a study that compared the usefulness of several nuclear and mitochondrial genes for identiWcation of nematodes, the ribosomal 18S gene was found to be the most consistently ampliWable and assigned over 97% of specimens to the correct species (Bhadury et al. 2006).”
Spatiotemporal analysis of population genetic structure in Geomonhystera disjuncta (Nematoda, Monhysteridae) reveals high levels of molecular diversity (2007, background): “Such information is crucial to any assessment of marine nematode species diversity and to barcoding attempts for the phylum Nematoda in general.”