Perfect sorting by reversals is not always difficult

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Automatic Prediction of Protein 3D Structures by Probabilistic Multi-template Homology Modeling (2015, background): “The idea is similar to [21], who proposed a neural network (NN) for picking the first template.”
CREx: inferring genomic rearrangements based on common intervals (2007, methodology): “While testing CREx we found that, to the best of our knowledge, all reported cases of TDRL events in mitochondrial gene orders in the literature were correctly identified ( Arndt and Smith 1998; Inoue et al., 2003).”
A Methodological Framework for the Reconstruction of Contiguous Regions of Ancestral Genomes and Its Application to Mammalian Genomes (2008, background): “[28,29]; in particular, in [22,30,31], PQ-trees were already”