NRPS-PKS: a knowledge-based resource for analysis of NRPS/PKS megasynthases

By M. Z. Ansari, G. Yadav, Rajesh S. Gokhale, D. Mohanty. Nucleic Acids Res., 2004

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NRPSpredictor2—a web server for predicting NRPS adenylation domain specificity (2011, methodology): “Many NRPS services like the NRPS-PKS knowledgebase, the NP.searcher or the system devised by Bachmann et al. make use of this speciﬁcity-conferring code to predict putative A-domain substrates (7–9).”
The Natural Product Domain Seeker NaPDoS: A Phylogeny Based Bioinformatic Tool to Classify Secondary Metabolite Gene Diversity (2012, background): “When the challenges associated with PKS and NRPS gene assembly can be overcome, a number of effective bioinformatics tools have been developed for domain parsing [19,20] and domain string analysis [21,22].”
Genomic analysis of antifungal metabolite production by Pseudomonas fluorescens Pf-5 (2007, methodology): “These signature motifs can be identified using web based bioinformatic algorithms ( Ansari et al. 2004; Challis et al. 2000) and, because of the colinearity rule, they can be used to predict the order, composition and number of amino acids in the final peptide product.”