Simpleaffy: a BioConductor package for Affymetrix Quality Control and data analysis

By Claire L. Wilson, Crispin J. Miller. Bioinform., 2005

437 citations recorded by the source corpus.

Subfields: Molecular Biology

View Paper: https://www.semanticscholar.org/paper/6389752e61f425e534724da317e45db5bef35961

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In Molecular Biology

1. M. W. Pfaffl
2. Wilhelm Gruissem
3. Fangxin Hong
4. Joanne Chory
5. Jennifer L. Nemhauser
6. Philip Zimmermann
7. L. Peck
8. Malcolm R. Clark

Citations in the corpus

• Different plant hormones regulate similar processes through largely nonoverlapping transcriptional responses. (2006, methodology): “We performed standard Affymetrix quality-control procedures using the BioConductor packages simpleaffy (Wilson and Miller, 2005) and AffyPLM (Bolstad et al.”
• RefGenes: identification of reliable and condition specific reference genes for RT-qPCR data normalization (2011, methodology): “The quality of the arrays was assessed using various Bioconductor [31] packages, including AffyQCReport and SimpleAffy [32].”