Sibship reconstruction from genetic data with typing errors.

By Jinliang Wang. Genetics, 2004

976 citations recorded by the source corpus.

View Paper: https://www.semanticscholar.org/paper/5f363ba75a59d2ee9354feedd28ef9e404ff935d

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In Genetics

Citations in the corpus

Fragmentation and patch size shape genetic structure of brook trout populations (2013, neutral): “(Wang 2004).”
Division of labour and worker size polymorphism in ant colonies: the impact of social and genetic factors (2005, methodology): “For polygyne colonies, we assigned individuals to matrilines with the maximum-likelihood methods implemented in the computer program COLONY 1.1 (Wang 2004, available at http://www.zoo.cam.ac.uk/ioz/software.htm), using colony-level allele frequencies and assuming single mating.”
Genotyping errors: causes, consequences and solutions (2005, background): “The field of linkage analysis has made the greatest effort to take genotyping errors into account during analysi”
More than friends? Behavioural and genetic aspects of heterosexual associations in wild chacma baboons (2010, methodology): “The results from both Cervus and COLONY analyses were in total agreement.”
The physical, insemination, and reproductive quality of honey bee queens (Apis mellifera L.) (2011, methodology): “We analyzed the raw microsatellite data using the program COLONY ( Wang, 2004 ) to quantify the number and frequencies of each subfamily (patriline), from which we then calculated the observed mating number (No )a nd the effective paternity frequency (me) of each queen as in Tarpy et al. (2004).”
Effects of land use at a landscape scale on bumblebee nest density and survival (2010, methodology): “We used the maximum likelihood sibship reconstruction method implemented in colony software version 1.2 (Wang 2004) to identify workers that belonged to the same colony.”
Close-Kin Mark-Recapture (2016, background): “Sibship is also connected with short-term “effective population size” (Ne: Crow and Kimura, 1970), and indeed Wang (2009) uses within-cohort sibship to estimate Ne.”
The size of wild honeybee populations (Apis mellifera) and its implications for the conservation of honeybees (2007, positive): “We used the maximum likelihood method of COLONY (Wang 2004) to estimate the number of colonies from which the drones originated.”
Revising how the computer program cervus accommodates genotyping error increases success in paternity assignment (2007, result): “2002; Wang 2004; Kalinowski et al .”
Anthropogenic and natural disturbance lead to differing patterns of gene flow in the Rocky Mountain tailed frog, Ascaphus montanus. (2010, positive): “Finally, because a large number of larval individuals were sampled, we used a maximum likelihood algorithm implemented in the software Colony (Wang, 2004) to assign individuals within the same generation (i.”