The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models
By Jürgen Kopp, Torsten Schwede. Nucleic Acids Res., 2004
360 citations recorded by the source corpus.
View Paper: https://www.semanticscholar.org/paper/5999e4c141baa4cf08afada7c041e5fab488da36
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- Ben M. Webb
- Yang Zhang
- Torsten Schwede
- Andrej Sali
- Andriy Kryshtafovych
- Lorenza Bordoli
- John Moult
- Sheng Wang
Citations in the corpus
- Outcome of a Workshop on Applications of Protein Models in Biomedical Research (2009, methodology): “The Protein Model Portal in particular provides access to models calculated by SWISS-MODEL (Kopp and Schwede, 2004), ModBase (Pieper et al.”
- Outcome of a workshop on archiving structural models of biological macromolecules. (2006, background): “Modbase (Sanchez et al., 2000), SwissModel (Kopp and Schwede, 2004), and other tobe-developed resources contributing and exchanging model metadata via a common standard would form other nodes in the grid.”
- The Protein Model Portal (2008, background): “…portal federates protein model data from different providers (CSMP, JCSG, MCSG, NESG, NYSGXRC, JCMM, Mod-Base [10], and SWISS-MODEL Repository [22, 23]) by integrating model meta information: the segment of a target protein for which a model is available, template structure (PDB ID and…”
- The SWISS-MODEL Repository: new features and functionalities (2005, methodology): “Databases of models generated by automated procedures on large scale, such as SWISS-MODEL Repository (16) or ModBase (17) The online version of this article has been published under an open access model.”
- The SWISS-MODEL Repository and associated resources (2008, methodology): “Therefore, comprehensive databases of pre-computed models (27,37,38) have been developed in order to be able to cross-link real-time model information with other biological data resources, such as sequence databases or genome browsers.”
- Structural genomics is the largest contributor of novel structural leverage (2009, background): “The fact that homologous protein domains have similar structures enables the application of homology, or comparative, modeling methods [17, 32].”