SOLVING TAXONOMIC AND NOMENCLATURAL PROBLEMS IN PACIFIC GIGARTINACEAE (RHODOPHYTA) USING DNA FROM TYPE MATERIAL

By Jeffery R. Hughey, P. Silva, M. Hommersand. 2001

171 citations recorded by the source corpus.

Subfields: Ecology, Oceanography, Plant Science

View Paper: https://www.semanticscholar.org/paper/56acd1319c60bb2e58d18ac79c20568fcc62e648

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Citations in the corpus

Morphometric and molecular analyses confirm two distinct species of Calliarthron (Corallinales, Rhodophyta), a genus endemic to the northeast Pacific (2011, methodology): “This methodology was demonstrated by Hughey et al. (2001, 2002) who sequenced relatively short DNA segments (, 200 base pairs [bp]) of the nuclear encoded internal transcribed spacer 1 region (ITS 1) or the plastid-encoded RUBISCO spacer from numerous type specimens to clarify the use of species…”
Linnaeus was right all along: Ulva and Enteromorpha are not distinct genera (2003, methodology): “Total DNA was extracted from fresh cultured or rehydrated material 278H. S. Hayden et al. using a modified CTAB method (Doyle & Doyle, 1990; Hughey et al., 2001). rbcL sequences of eight European taxa were obtained from genomic DNA previously used for ITS nrDNA sequences published elsewhere (Table…”
Distribution and Identification of an Invasive Gracilaria Species that is Hampering Commercial Fishing Operations in Southeastern North Carolina, USA (2006, unknown): “This marker system also identified the newly abundant Gracilaria species as G. vermiculophylla, a species considered to be invasive in other areas of the world ( Bellorin et al. 2004; Gurgel and Fredericq 2004; Rueness 2005).”
A DNA barcode examination of the Laminariaceae (Phaeophyceae) in Canada reveals novel biogeographical and evolutionary insights (2010, methodology): “…(rbcL; Hughey et al. 2001; Yoon et al. 2001) and photosystem I (psaA; Cho et al. 2006) and the nuclear large subunit (LSU; Erting et al. 2004; Saunders & Lehmkuhl 2005) and internal transcribed spacer region of the ribosomal cistron (ITS; Hughey et al. 2001; Ross et al. 2003; Shi et al. 2005).”
PHYLOGENETIC SYSTEMATICS OF THE ULVACEAE (ULVALES, ULVOPHYCEAE) USING CHLOROPLAST AND NUCLEAR DNA SEQUENCES 1 (2002, methodology): “Total DNA was extracted from rehydrated or fresh culture material using a modified hexadecyltrimethylammonium bromide (CTAB) method (Doyle and Doyle 1990, Hughey et al. 2001).”
A molecular method for identification of the morphologically plastic invasive algal genera Eucheuma and Kappaphycus (Rhodophyta, Gigartinales) in Hawaii (2009, methodology): “Genomic DNA was extracted from herbarium material using a modified Dellaporta et al. (1983) protocol described by Hughey et al. (2001) and from silica-dried and frozen material using a DNeasy Plant Mini Kit (Qiagen, USA).”
MOLECULAR ASSESSMENT OF ULVA SPP. (ULVOPHYCEAE, CHLOROPHYTA) IN THE HAWAIIAN ISLANDS 1 (2010, methodology): “DNA from herbarium material was extracted following the protocol of Hughey et al. (2001) (based on an extraction buffer described by Dellaporta et al. 1983), except that two chloroform extractions were performed instead of one.”
New, resurrected and redefined species of Mastocarpus (Phyllophoraceae, Rhodophyta) from the northeast Pacific (2011, methodology): “Here we assign names to clades by performing genetic analyses on type material (Hughey et al. 2001, 2002).”
Tracking biological invasions in space and time: elucidating the invasive history of the green alga Codium fragile using old DNA (2007, unknown): “…studies to date, all involving red algae, are the taxonomic clarification based on ITS1 sequence of several members of the Gigartinaceae (Hughey et al ., 2001, 2002) and the Ceramiales (Gabrielsen et al ., 2003; Skage et al ., 2005), and the elucidation of the rbcL-rbcS spacer sequence…”
Applying DNA barcoding to red macroalgae: a preliminary appraisal holds promise for future applications (2005, background): “2003), the rubisco operon (rbcL; Hughey et al. 2001), and variable”
Acquiring DNA sequence data from dried archival red algae (Florideophyceae) for the purpose of applying available names to contemporary genetic species: a critical assessment (2012, methodology): “In this study, we set three objectives: (1) Test a routine DNA extraction protocol (ultimately two variants, G&Dmini and G&Dn), modified from Saunders’ published protocol (Saunders 1993, 2008), relative to the most widely applied red algal extraction protocol currently being used for acquiring DNA f”
Systematics and genetic variation in commercial shape Kappaphycus and shape Eucheuma (Solieriaceae, Rhodophyta) (2006, background): “More research into the higher level relationships of these genera is needed, that should include wide-spread geographic and taxonomic sampling and use of molecular data from types ( Hughey et al., 2001 ).”