The BLAST Sequence Analysis Tool

By Thomas L. Madden. 2013

732 citations recorded by the source corpus.

How researchers see this paper

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1. Ryan R. Wick
2. Louise M. Judd
3. Kathryn E. Holt
4. C. Gorrie
5. Maria Jesus Martin
6. Alperen Dalkıran
7. A. Rifaioglu
8. Tunca Dogan

Citations in the corpus

• ECPred: a tool for the prediction of the enzymatic functions of protein sequences based on the EC nomenclature (2018, methodology): “In order to classify a target protein, the k -nearest neighbor algorithm is used, where the similarities between the query protein and proteins in the training dataset are calculated using the NCBI-BLAST tool [35]. k -nearest neighbors with the highest BLAST scores are extracted.”
• Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads (2016, methodology): “MG1655 reference genome’s seven RNA operons in the assemblies using BLAST.”