Macromolecular modeling and design in Rosetta: recent methods and frameworks (2020, methodology): “Modeling antibodies and other proteins in the immune system RosettaMHC RosettaMHC 216 utilizes homology modeling and energy minimization to predict structural complexes of antigen/MHC-I/(chaperone or TCR) molecules.”
TreePM: A code for cosmological N-body simulations (1999, methodology): “It is possible to devise a more complex scheme for splitting the force into two parts but the one we have chosen seems to be the optimal scheme from the point of view of errors in force calculation as well as CPU time (Bagla and Ray 2002).”
The independence of combinatory semantic processing: Evidence from event-related potentials (2005, background): “By contrast, syntactically anomalous words elicit a large positive wave that onsets approximately 500 ms after the word appears and persists for at least half a second (the P600 effect) (Hagoort, Brown, & Groothusen, 1993; Osterhout, 1997; Osterhout & Holcomb, 1992, 1993; Osterhout, McKinnon, Bersic”
Fuel cell materials and components (2003, background): “The strong dependence of ionic conductivity on dopant type and concentration has been explained in terms of the lattice distortions introduced by the dopant, with those that produce the least amount of strain causing the smallest variation in the potential energy landscape [29].”