Phylogeny of Basal Angiosperms: Analyses of Five Genes from Three Genomes1

By Y. Qiu, Jungho Lee, F. Bernasconi‐Quadroni, D. Soltis, Pamela S. Soltis, M. Zanis, E. Zimmer, Zhiduan Chen, V. Savolainen, Mark W. Chase. INTERNATIONAL JOURNAL PLANT SCIENCES, 2000

250 citations recorded by the source corpus.

Subfields: Ecology, Evolution, Behavior and Systematics, Molecular Biology

View Paper: https://www.semanticscholar.org/paper/466c5f5d1145896aad3c9084d26399216b02edd4

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In Ecology, Evolution, Behavior and Systematics

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Citations in the corpus

Phylogenetic Relationships in Fagales Based on DNA Sequences from Three Genomes (2004, methodology): “We used multiple genes with different functions from all three genomes to minimize homoplasy generated by gene-, function-, and genome-specific molecular evolutionary phenomena (Qiu et al. 2000).”
Phylogeny of Aristolochiaceae based on parsimony, likelihood, and Bayesian analyses of trnL-trnF sequences (2004, background): “This difficulty has been encountered in both molecular (e.g. Doyle and Endress 2000, Qiu et al. 2000, Soltis et al. 2000) and morphology-based studies (Doyle and Endress 2000, González and Rudall 2001).”
Phylogeny of basal eudicots: Insights from non-coding and rapidly evolving DNA (2007, background): “The clade has gained maximum support when three or more genes were combined (Qiu et al. 2000; Soltis et al. 2000; Kim et al. 2004).”
Morphological Phylogenetic Analysis of Living and Fossil Chloranthaceae (2004, methodology): “We therefore aimed to represent all taxa that have been associated with Saururaceae, Amborella, and Trimenia in molecular and combined analyses (Qiu et al. 1999, 2000; Doyle and Endress 2000; Soltis et al. 2000a).”
A 567‐Taxon Data Set for Angiosperms: The Challenges Posed by Bayesian Analyses of Large Data Sets (2007, background): “…as sister to all other angiosperms (e.g., Mathews and Donoghue 1999; 152 INTERNATIONAL JOURNAL OF PLANT SCIENCES Parkinson et al. 1999; Qiu et al. 1999, 2000, 2005; Soltis et al. 1999, 2000a; Graham et al. 2000; Zanis et al. 2002, 2003; Borsch et al. 2003; Hilu et al. 2003; Kim et al.…”
Monetianthus mirus gen. et sp. nov., a Nymphaealean Flower from the Early Cretaceous of Portugal (2009, unknown): “…analyses using molecular data place Nymphaeales between Amborellaceae and Austrobaileyales (Austrobaileyaceae, Illiciaceae, Schisandraceae, and Trimeniaceae), two lineages of woody angiosperms (Qiu 1999, 2005; Qiu et al. 2000, 2006; Soltis et al. 2000; Zanis et al. 2003; Saarela et al. 2007).”
Reproductive Structure and Organization of Basal Angiosperms from the Early Cretaceous (Barremian or Aptian) of Western Portugal (2000, background): “Some evidence is beginning to emerge that those lineages identified as basal among angiosperms in the molecular analyses and combined molecular/morphological analyses (recently referred to as the ANITA group: Amborellaceae, Nymphaeales, Illiciales, Trimeniaceae, and Austrobaileyaceae; Qiu et al. 199”
ASTRAL-II: coalescent-based species tree estimation with many hundreds of taxa and thousands of genes (2015, methodology): “2014; Qiu et al. 2000; Wickett et al. 2014; Zhang et al. 2012) is that A.trichopoda Baill. is sister to the rest of angiosperms, followed by water lilies (i.e. Nymphaeales). In particular, a recent analysis of 104 plant species based on entire transcriptomes recovered this relationship both with con”
Evolution of Endosperm Developmental Patterns among Basal Flowering Plants (2000, background): “…et al. 1993; Duvall et al. 1993a, 1993b), several magnoliid taxa representing lineages now resolved as the ANITA grade and eumagnoliid clade (sensu Qiu et al. 1999, 2000), as well as Ceratophyllaceae and Chloranthaceae whose phylogenetic affinities are variously resolved in different analyses…”
Molecular dating of the ‘Gondwanan’ plant family Proteaceae is only partially congruent with the timing of the break‐up of Gondwana (2007, background): “Together with their close relatives Platanus and Nelumbo, Proteaceae form one of the early-diverging lineages in the eudicot clade of angiosperms (Hoot et al., 1999; Qiu et al., 2000; Soltis et al., 2000; APG, 2003; Hilu et al., 2003; Kim et al., 2004), with a fossil record that dates back to the mi”
Phylogeny, Molecular and Fossil Dating, and Biogeographic History of Annonaceae and Myristicaceae (Magnoliales) (2004, background): “The relationships of these four orders are not conclusively resolved, but most recent large-scale analyses have grouped Laurales and Magnoliales (Qiu et al. 2000; Soltis et al. 2000; Zanis et al. 2002), and this is supported over the most commonly encountered alternative relationship (Winterales and”
Early evolutionary history of the flowering plant family Annonaceae: steady diversification and boreotropical geodispersal (2011, unknown): “SBC, short-branch clade of Annonaceae; LBC, long-branch clade of Annonaceae.”