TOM software toolbox: acquisition and analysis for electron tomography.

By S. Nickell, F. Förster, Alexandros A. Linaroudis, William Del Net, F. Beck, R. Hegerl, Wolfgang Baumeister, J. Plitzko. Journal of Structural Biology, 2005

459 citations recorded by the source corpus.

Subfields: Metals and Alloys, Structural Biology, Surfaces, Coatings and Films

View Paper: https://www.semanticscholar.org/paper/44c0ba7807ffbc542bd031a65c762b770357c514

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Citations in the corpus

TomoJ: tomography software for three-dimensional reconstruction in transmission electron microscopy (2007, methodology): “Thus, unlike other public domain software for electron tomography reconstruction (IMOD [18], TOM [29], EM3D [30], and USCF tomography [31]) TomoJ can perform 3D reconstruction using the ART [20] and SIRT [21].”
The ASTRA Toolbox: A platform for advanced algorithm development in electron tomography. (2015, methodology): “Within the academic community, several free packages have been developed including IMOD [10, 11], EFTET-J [7], Protomo [12], UCSF tomography [13, 14], TomoJ [15], TOM Toolbox [16] and TxBR [17].”
Automated electron microscope tomography using robust prediction of specimen movements. (2005, methodology): “For tomography of beam-sensitive specimens such as frozen-hydrated material, the standard approach has been to take focus and tracking images at a location displaced from the area of interest along the tilt axis (Dierksen et al., 1993; Nickell et al., 2005; Rath et al., 1997).”
Dynamo: a flexible, user-friendly development tool for subtomogram averaging of cryo-EM data in high-performance computing environments. (2012, methodology): “In this sense, the TOM package (Nickell et al., 2005) provides a framework for the tool AV3 (Forster and”