Proteomic discovery of cellular substrates of the ClpXP protease reveals five classes of ClpX-recognition signals.

By J. Flynn, S. Neher, Y. I. Kim, R. Sauer, T. Baker. Molecules and Cells, 2003

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AAA+ proteins: have engine, will work (2005, background): “Other motifs that direct proteins for degradation by ClpXP in Escherichia coli were identified by examining the sequences of proteins that accumulate in a proteolytically inactive ClpXP substrate tra”
Proteasomes and their kin: proteases in the machine age (2004, methodology): “However, in a recent experiment, Flynn et al.62 used a protease-dead version of ClpXP to capture intact substrates in vivo (see figure; see also REF.”