TANDEM: integrating automated allele binning into genetics and genomics workflows

By Michael Matschiner, Walter Salzburger. Bioinform., 2009

310 citations recorded by the source corpus.

Subfields: Genetics

View Paper: https://www.semanticscholar.org/paper/373ab15d87b865c1bd314abe9069b12d9c1cb296

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In Genetics

1. R. Jacinto
2. E. Serrão
3. R. Petit
4. S. Wagner
5. Olivier Lepais
6. Thibaut Malausa
7. G. Pearson
8. Philippe Chaumeil

Citations in the corpus

• Upwelling areas as climate change refugia for the distribution and genetic diversity of a marine macroalga (2016, methodology): “Allele sizes were scored using STRAND 2.4.59 software (http://www.vgl.ucdavis.edu/informatics/STRand), binned with the RUBY 1.9.3 package TANDEM 1.09 (Matschiner & Salzburger, 2009) and manually reviewed for ambiguities.”
• Current trends in microsatellite genotyping (2011, methodology): “This suggests that SSRs could remain useful in the future if at least some of the technical problems identified are overcome (Glaubitz et al. 2003; Schlötterer 2004; Ryynänen et al. 2007; Matschiner & Salzburger 2009).”