RECOORD: A recalculated coordinate database of 500+ proteins from the PDB using restraints from the BioMagResBank

By A. Nederveen, J. Doreleijers, W. Vranken, Zachary Miller, Chris A. E. M. Spronk, Sander B. Nabuurs, Peter Güntert, Miron Livny, John L. Markley, Michael Nilges and 3 more. Proteins: Structure, Function, and Bioinformatics, 2005

341 citations recorded by the source corpus.

Subfields: Materials Chemistry, Molecular Biology

View Paper: https://www.semanticscholar.org/paper/35f7c4d52cff65c3472b0b7ac9e007cc20f8f1e2

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In Materials Chemistry

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Citations in the corpus

PDBe: Protein Data Bank in Europe (2010, background): “This program may suggest a systematic correction of the deposited chemical shifts and also identifies any chemical shift outliers based on statistics that take into account the atom type, secondary NMR entries in the PDB 8592 NMR entries with OLDERADO report 6440 NMR entries with NRG restraints 5864”
BioMagResBank (2007, methodology): “Data from previous implementations of the FRED database have been used by several groups to recalculate 3D structures (31–34).”
PONDEROSA-C/S: client–server based software package for automated protein 3D structure determination (2014, methodology): “Alternatively, water bath reﬁnement, as inspired by the RECOORD and ARIA projects (Nederveen et al. 2005; Linge et al. 2003) can be generated and executed by use of CNS (Bru¨nger et al. 1998).”