Distribution of microbial communities in a forest soil profile investigated by microbial biomass, soil respiration and DGGE of total and extracellular DNA

By A. Agnelli, J. Ascher, G. Corti, M. Ceccherini, P. Nannipieri, G. Pietramellara. 2004

339 citations recorded by the source corpus.

Subfields: Ecology, Ecology, Evolution, Behavior and Systematics, Soil Science

View Paper: https://www.semanticscholar.org/paper/354dc2cae2705abd314bdc9b3e603b9a17cd6ef7

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In Ecology

In Ecology, Evolution, Behavior and Systematics

In Soil Science

Citations in the corpus

Extracellular DNA in soil and sediment: fate and ecological relevance (2009, methodology): “…of eDNA in soil can range from 0.03 to 200 μg g−1 of soil (Table 2; Torsvik and Goksøyr 1978; Reanney et al. 1982; Selenska and Klingmueller 1992; Frostegård et al. 1999; Agnelli et al. 2004), and they decrease along the soil profile (Fritze et al. 2000; Agnelli et al. 2004, 2007).”
Oral multispecies biofilm development and the key role of cell–cell distance (2010, background): “and has been reported in natural microbial populations such as soil ecosystem”
Methods for evaluating human impact on soil microorganisms based on their activity, biomass, and diversity in agricultural soils (2006, neutral): “2 (n = 6) Agnelli et al. (2004)”
Differential impact on soil microbes of allelopathic compounds released by the invasive Acacia dealbata Link (2013, background): “Soil fungal communities in forests might have a higher stability than soil bacterial communities (Agnelli et al., 2004). However, fungi and other slowly growing organisms are difficult to detect using the Biolog Ecoplates! technique as discussed by Zhang et al. (2009). This result might also be due ”
Effects of continuous cucumber cropping and alternative rotations under protected cultivation on soil microbial community diversity (2006, background): “More recently, there is an increasing interest in the analysis of soil microbial community structure (Agnelli et al., 2004; Buyer and Drinkwater, 1997; Garland and Mills, 1991; Salles et al., 2004).”
Soil-carbon preservation through habitat constraints and biological limitations on decomposer activity (2008, neutral): “40 m depth in two forests and two grasslands (Ekelund et al., 2001; Fierer et al., 2003; Agnelli et al., 2004).”
Digging deeper to find unique microbial communities: The strong effect of depth on the structure of bacterial and archaeal communities in soil (2012, background): “2), a pattern similar to those found in other fingerprintingbased studies (Agnelli et al., 2004; Fierer et al., 2003; Goberna et al., 2005; LaMontagne et al., 2003; Will et al., 2010).”
Relationship between vegetation diversity and soil functional diversity in native mixed-oak forests (2008, background): “After all, soil physicochemical and biological properties are known to change with soil depth (Agnelli et al., 2004).”
Relic DNA is abundant in soil and obscures estimates of soil microbial diversity (2016, background): “58 Given the potential for extracellular DNA to persist in soil, we hypothesized that 59 DNA from dead microbes (which we term ‘relic DNA’) may obscure DNA-based 60 estimates of the diversity and structure of soil microbial communities (13, 14).”