PHYLOGENY OF DINOFLAGELLATES BASED ON MITOCHONDRIAL CYTOCHROME B AND NUCLEAR SMALL SUBUNIT RDNA SEQUENCE COMPARISONS 1

By Huan Zhang, Debashish Bhattacharya, Senjie Lin. 2005

181 citations recorded by the source corpus.

Subfields: Ecology, Molecular Biology

View Paper: https://www.semanticscholar.org/paper/32d84980c757e62f68c17ad7ea4f40a43552f59d

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In Ecology

1. Fabrice Not
2. Daniel Vaulot
3. Sophie Dove
4. O. Hoegh‐Guldberg
5. U. Tillmann
6. U. John
7. N. Simon
8. W. Leggat

In Molecular Biology

1. U. John
2. U. Tillmann
3. Fabrice Not
4. Daniel Vaulot
5. A. Cembella
6. N. Simon
7. B. Krock
8. O. Hoegh‐Guldberg

Citations in the corpus

• Azadinium spinosum gen. et sp. nov. (Dinophyceae) identified as a primary producer of azaspiracid toxins (2009, methodology): “The following primers were used for amplification of the cytochrome oxidase 1 (COI) gene: COIF (50-AAAAATTGTAATCATAAACGC TTAGG-30) and COIR (50-TGTTGAGCCACCTA TAGTAAACATTA-30) (Zhang et al., 2005).”
• Symbiodinium tridacnidorum sp. nov., a dinoflagellate common to Indo-Pacific giant clams, and a revised morphological description of Symbiodinium microadriaticum Freudenthal, emended Trench & Blank (2015, unknown): “The partial chloroplast cp23S and mitochondrial cob genes were amplified and directly sequenced for all cultures and field-collected samples according to Zhang et al. (2000) and Zhang et al. (2005), respectively (Table S1).”
• Analysis of an EST library from the dinoflagellate (Symbiodinium sp.) symbiont of reef‐building corals 1 (2007, background): “These studies now constitute over 49,000 ESTs. Recent genetic analysis of the dinoflagellates (Tengs et al. 2000, Zhang et al. 2005) has confirmed that they are a sister group to the apicomplexan complex and suggests that Symbiodinium is a monophyletic group within the dinoflagellates that diverged…”
• Biology, ecology and bloom dynamics of the toxic marine dinoflagellate Pyrodinium bahamense (2012, methodology): “…inference of P. bahamense constructed based on nuclear encoded SSU ribosomal RNA genes (Usup et al., 2002; Zhang et al., 2005), LSU rRNA gene (Ellegaard et al., 2003; Leaw et al., 2005), and mitochondrial cytochrome b (Zhang et al., 2005) generally place Pyrodinium in the Gonyaulacales (Fig.”
• Diversity and Ecology of Eukaryotic Marine Phytoplankton (2012, background): “Phylogenetic studies carried out using plastid genes (rbcl, atpB) are limited since many dinoflagellates are heterotrophic, and mitochondrial genes (cob and cox 1) are only useful in combination with other genetic markers and for specific groups of dinoflagellates (Zhang et al., 2005).”