ProMod and Swiss-Model: Internet-based tools for automated comparative protein modelling.
By Manuel C. Peitsch. 1996
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- Jürgen Kopp
- Torsten Schwede
- Yang Zhang
- Lorenza Bordoli
- Nicolas Guex
- Vivek K. Vyas
- J. Battey
- N. A. Spiridonov
Citations in the corpus
- Automated server predictions in CASP7 (2007, methodology): “78,79 During the following experiments, numerous predictors registered their meth-ods as servers and were assessed separately as part of the CAFASP experiment series.”
- Identification of target amino acids that affect interactions of fungal polygalacturonases and their plant inhibitors (2000, methodology): “The threading program of the SwissModel server was used in the First Approach Mode [ 36 ] to partially align the structures of fungal PGs to the known structure of PehA from Erwinia carotoaora ssp.”
- The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models (2004, methodology): “A huge and constantly growing number of structurally uncharacterized protein sequences together with the increasing number of available template structures motivated the development of automated, stable and reliable modelling methods (23,24).”
- SWISS-MODEL: an automated protein homology-modeling server (2003, methodology): “The idea of an easy-to-use, automated modeling facility with integrated expert knowledge was first implemented 10 years ago by Peitsch et al. (7–9) and formed the starting point for the SWISS-MODEL server.”
- Cloning and Biochemical Characterization of BglC, a β-Glucosidase from the Cellulolytic Actinomycete Thermobifida fusca (2001, methodology): “Computer modeling of the three-dimensional structure with the Swiss-Model program predicts that BglC is an ( a/b)8 barrel [18].”
- Progress in protein structure prediction. (1997, result): “The success of SWISS-MODEL is a very important progression in the modelling field.”