The Genome of the Natural Genetic Engineer Agrobacterium tumefaciens C58

By D. Wood, J. Setubal, R. Kaul, D. E. Monks, J. Kitajima, V. Okura, Yang Zhou, Li-shan Chen, G. Wood, N. Almeida and 41 more. Science, 2001

842 citations recorded by the source corpus.

Subfields: Plant Science

View Paper: https://www.semanticscholar.org/paper/2e9e7701a99258008046fb67513fc158c115cf92

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In Plant Science

1. Denis Faure
2. J. Leveau
3. D. Vereecke
4. L. Philippot
5. S. Hallin

Citations in the corpus

• The unaccounted yet abundant nitrous oxide-reducing microbial community: a potential nitrous oxide sink (2012, background): “For example, genome sequencing of Agrobacterium tumefaciens first revealed that denitrifying bacteria can lack the nosZ gene, which encodes the N2O reductase (N2OR) that catalyzes the reduction of N2O to N2 (Wood et al., 2001).”
• Comparative Genomics of Multidrug Resistance in Acinetobacter baumannii (2006, neutral): “Putative tetA (efflux pump) (12_578) Unknown No (CT025784) Yes (96%) (AM086635) No A. tumefaciens (43%) [ 54 ]”
• Increasing biological complexity is positively correlated with the relative genome-wide expansion of non-protein-coding DNA sequences (2003, neutral): “87 [75] Streptomyces coelicolor 0.111 7825 8670000 [76] Chlorobium tepidum TLS 0.111 2288 2154946 [77] Prochlorococcus marinus 0.115 1884 1751080 [78] Agrobacterium tumefaciens C58 0.117 5419 5674062 [79] Mycoplasma genitalium 0.12 470 580070 [80] Pyrobaculum aerophilum 0.12 2587 2200000 [81] Procho”
• Molecular communication in the rhizosphere (2009, background): “The genome of A. tumefaciens C58 is rich in ABC-genes that would participate in the sensing and transport of a large range of organic and inorganic compounds (Wood et al. 2001).”
• Importance of denitrifiers lacking the genes encoding the nitrous oxide reductase for N2O emissions from soil (2011, background): “…reductase from the two chromosomes as well as the At and Ti plasmids, while the other deni- trification genes encoding the periplasmic nitrate re- ductase, copper nitrite reductase and the nitric oxide reductase cluster together on a 28 kb island on the linear chromosome 2 (Wood et al., 2001).”