Proposed minimum reporting standards for chemical analysis

By Lloyd W. Sumner, A. Amberg, Dave Barrett, M. Beale, R. Beger, C. Daykin, Teresa W.-M. Fan, Oliver Fiehn, Royston Goodacre, Julian L. Griffin and 12 more. Metabolomics, 2007

4,630 citations recorded by the source corpus.

Subfields: Ecology, Molecular Biology

View Paper: https://www.semanticscholar.org/paper/24e70394a03ee6f25e582e7ebb8039f1207fae0f

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Citations in the corpus

Software Tools and Approaches for Compound Identification of LC-MS/MS Data in Metabolomics (2018, methodology): “…the Metabolomics Society at the 2017 annual meeting These levels were initially forged by the Metabolomics Standards Initiative (MSI) of the Metabolomics Society [14,15] and were later refined by the compound identification workgroup of the society. of the Metabolomics Society Brisbane, Australia).”
Decision tree supported substructure prediction of metabolites from GC-MS profiles (2010, methodology): “Hence, this new web interface and application may contribute to the evidence-based classiﬁcation of non-identiﬁed MSTs and follows the general recommendations of the metabolomics standards initiative for reporting standards for chemical analysis (Sumner et al. 2007).”
Quality control for plant metabolomics: reporting MSI-compliant studies. (2008, methodology): “, 2007b) and on reporting of methodological details of chemical analysis (Sumner et al., 2007).”
MassBank: a public repository for sharing mass spectral data for life sciences. (2010, methodology): “Although standardization of experimental methods of mass spectrometry is thought to be essential for sharing the mass spectral data of chemical compounds and standardized procedures to unify experimental protocols have been proposed, the metabolomics research community has not reached consensus on t”
Proposed minimum reporting standards for data analysis in metabolomics (2007, methodology): “…are very much instrument-(and even manufacturer-) dependent and are discussed by the Chemical Analysis working group for MS (with and without chromatography; viz. gas chromatography (GC)-MS and liquid chromatography (LC)-MS), NMR spectroscopy, and FT-IR spectroscopy in Sumner et al. (2007) .”
Procedures for large-scale metabolic profiling of serum and plasma using gas chromatography and liquid chromatography coupled to mass spectrometry (2011, background): “Therefore, different levels of identification are available and the reporting procedures for metabolite identification in metabolomics has been described by the Metabolomics Standards Initiative (MSI”
Metabolomics for functional genomics, systems biology, and biotechnology. (2010, methodology): “In these situations, the Metabolomics Standard Initiative (MSI) recommended that the meta-information of metabolome data regarding plant context, chemical analysis, and data processing should be reported in a standardized format (51, 52, 186), which would act as an equivalent of MIAME for transcript”
Responses of the pea (Pisumsativum L.) leaf metabolome to drought stress assessed by nuclear magnetic resonance spectroscopy (2008, methodology): “2.7 NMR spectroscopy Experimental acquisition and processing parameters are provided in accordance with the recommendations in Sumner et al. (2007).”