MRI atlas of human white matter

By P. Szeszko, P. Kingsley. 2006

1,384 citations recorded by the source corpus.

Subfields: Radiology, Nuclear Medicine and Imaging

View Paper: https://www.semanticscholar.org/paper/233bd1164b3cd40177e2ddd3079a07e0a6a96fb4

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In Radiology, Nuclear Medicine and Imaging

Citations in the corpus

Brain maturation in adolescence and young adulthood: regional age-related changes in cortical thickness and white matter volume and microstructure. (2010, methodology): “The atlas contains tracts probabilistically represented in MNI space by averaging the results of deterministic tractography on 28 normal participants (Mori et al. 2005; Hua et al. 2008; Wakana et al. 2007).”
Human Brain White Matter Atlas: Identification and Assignment of Common Anatomical Structures in Superficial White Matter (2008, background): “Diffusion tensor imaging (DTI) is an MRI modality that can delineate WM structures based on the orientation information of axons (Basser et al., 1994; Makris et al., 1997; Mori et al., 2005; Pierpaoli et al., 1996; Wakana et al., 2004).”
Stereotaxic white matter atlas based on diffusion tensor imaging in an ICBM template (2008, background): “For detailed pictorial views of the nomenclature and locations of the white matter structures, please refer to our previous white matter atlases (Mori et al., 2005; Wakana et al., 2004).”
Atlasing location, asymmetry and inter-subject variability of white matter tracts in the human brain with MR diffusion tractography (2011, neutral): “Diffusion tensor imaging has allowed the study of the in vivo anatomy of white matter tracts in the human brain (Catani et al., 2002; Mori et al., 2002, 2005; Wakana et al., 2004; Catani and Thiebaut de Schotten, 2008; Ciccarelli et al., 2008; Lawes et al., 2008) and addressed some of the questions…”
Handbook of Functional MRI Data Analysis: Index (2011, background): “…atlases that can also be useful (e.g., Mai et al., 2004; Woolsey et al., 2008), and there are specialty atlases for specific brain regions such as cerebellum (Schmahmann, 2000), hippocampus (Duvernoy, 2005), subcortical structures (Lucerna et al., 2004), and white matter tracts (Mori et al., 2004).”
Reproducibility of quantitative tractography methods applied to cerebral white matter (2007, methodology): “…tract reconstruction (tractography) based on diffusion tensor imaging (DTI) is becoming a widely-used tool to study human white matter anatomy (Basser et al., 2000; Conturo et al., 1999; Jones et al., 1999b; Lazar et al., 2003; Mori et al., 1999, 2005; Parker et al., 2002; Poupon et al., 2000).”
Brain templates and atlases (2012, background): “…white-matter fiber tract atlases that can be used to examine fMRIbased studies of functional connectivity (Catani and Thiebaut de Schotten, 2008; Hua et al., 2008; Lawes et al., 2008; Mori et al., 2005, 2008; Oishi et al., 2008; Verhoeven et al., 2010; Wakana et al., 2004; Wassermann et al., 2010).”
Accelerated maturation of white matter in young children with autism: A high b value DWI study (2007, methodology): “ROIs were selected according to the MRI Atlas of Human White Matter and were labeled in the conventional way (Mori et al., 2005).”
Image processing and Quality Control for the first 10,000 brain imaging datasets from UK Biobank (2017, methodology): “For each of the DTI/NODDI maps, the skeletonised images are averaged within a set of 48 standard-space tract masks defined by the group of Susumu Mori at Johns Hopkins University Mori et al. (2005) and Wakana et al.”
Meta-analysis of diffusion tensor imaging studies in schizophrenia. (2009, methodology): “White matter tracts passing through clusters of voxels showing significant fractional anisotropy differences were mapped by reference to an atlas of human white matter anatomy (Mori et al., 2005), supplemented by DTIquery software (Sherbondy et al., 2005).”
Multi-Contrast Human Neonatal Brain Atlas: Application to Normal Neonate Development Analysis (2011, positive): “The deep white matter structures identified in our previous studies of adult brains (Mori et al., 2008; Mori et al., 2005; Oishi et al., 2009)were readily identified in the neonate brains using DTI contrasts.”
Decreased white matter integrity in late-myelinating fiber pathways in Alzheimer's disease supports retrogenesis (2008, methodology): “Two WM atlases within FSL (ICBM-DTI-81 parcellation map and JHU WM tractography atlas) guided the placement of the ROIs and they were further verified using a DTI color map human atlas (Mori et al., 2005) and a white matter atlas based on data from the rhesus”
QuickBundles, a Method for Tractography Simplification (2012, background): “Nonetheless, neuroanatomists often disagree on definition of major structures or on which streamlines correspond to actual tracts (Catani et al., 2005; Makris et al., 2005; Mori et al., 2005; Frey et al., 2008; Schmahmann and Pandya, 2009; Verstynen et al., 2011; Fernandez-Miranda et al., 2012).”
Life-span changes of the human brain white matter: diffusion tensor imaging (DTI) and volumetry. (2010, methodology): “Further, binary masks based on the probabilistic JHU white-matter tractography atlas (Wakana et al. 2004; Mori et al. 2005; Hua et al. 2008) were created with a probability threshold of 5%, chosen to accommodate individual variation in WM architecture (Westlye, Walhovd, Bjørnerud, et al.”
Dipy, a library for the analysis of diffusion MRI data (2014, background): “One of the major achievements of this field is that it is now possible to reliably and accurately identify major fascicles in individual experimental participants or patients (Mori et al., 2005).”
Differences in White Matter Fiber Tract Development Present from 6 to 24 Months in Infants with Autism (2012, methodology): “Seed label maps were created based on methods described in existing tractography atlases (46, 47) and drawn in the combined atlas for regions of interest (ROI) using 3D Slicer (www.”
Developmental Stages and Sex Differences of White Matter and Behavioral Development through Adolescence: A Longitudinal Diffusion Tensor Imaging (DTI) Study (2013, positive): “Both of these tracts link orbital and medial prefrontal cortical regions to medial temporal regions, with the cingulum functioning as a dorsal limbic pathway, and the uncinate as a ventral limbic pathway (Mori et al., 2005; Schmahmann et al., 2007).”