Gepard: a rapid and sensitive tool for creating dotplots on genome scale

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CPGView: A package for visualizing detailed chloroplast genome structures (2023, methodology): “GePard (version 1.40) software (Krumsiek et al., 2007) was used to select chloroplast genome conformations and draw dotplot pictures.”
A Broadly Implementable Research Course in Phage Discovery and Genomics for First-Year Undergraduate Students (2014, methodology): “Comparative genomics used Phamerator (31) and Gepard (58).”
Insights into Land Plant Evolution Garnered from the Marchantia polymorpha Genome. (2017, methodology): “REAGENT or RESOURCE SOURCE IDENTIFIER Gepard (Krumsiek et al., 2007) http://mips.gsf.de/services/analysis/gepard BLAT - the BLAST-like alignment tool (Kent, 2002) https://www.soe.ucsc.edu/?kent MIRA ver.”
Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity (2015, neutral): “were concatenated into a single file which was compared with itself using Gepard (Krumsiek et al., 2007) and displayed as a dotplot using default”