Mixed-Effects Models in S and S-PLUS

By Josae C. Pinheiro, D. Bates. 2002

1,587 citations recorded by the source corpus.

View Paper: https://www.semanticscholar.org/paper/14ce8e1fba34b4bfa8823997f05929d61232ee88

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In Materials Chemistry

Citations in the corpus

Wind field and sex constrain the flight speeds of central‐place foraging albatrosses (2009, methodology): “We modeled inter- and intraspecific variations in ground speed Vg in response to wind speed component Vwf, and so on, using linear mixed-effects (LMEs) models fitted using maximum likelihood (Pinheiro and Bates 2000), implemented with the nlme package (Pinheiro et al. 2005).”
Relative allocation to horn and body growth in bighorn rams varies with resource availability (2004, neutral): “We assessed model goodness-of-fit using Akaike’s information criterion (Pinheiro and Bates, 2000).”
From start to finish: a framework for the production of small area official statistics (2018, methodology): “In the second step the GLS and standard linear regression models with the set of six covariates that were identified above were compared against each other.”
Family Processes and Suicidal Ideation among Chinese Adolescents in Hong Kong (2011, positive): “Researchers advocated the use of this variance-covariance testing approach as it improves model predictions and statistic inferences, especially when examining random effects models[43,44].”
The BLUPs are not "best" when it comes to bootstrapping (2002, neutral): “intervals give by lme, which are approximate con3dence intervals that rely on the empirical information matrices and conditional t-tests (see Pinheiro and Bates, 2000 ).”
FlexMix Version 2: Finite Mixtures with Concomitant Variables and Varying and Constant Parameters (2008, positive): “This grouping is specied in adding | Center to the formula similar to the notation used in nlme ( Pinheiro and Bates 2000 ).”
ASREML user guide release 1.0 (2002, methodology): “Pinheiro and Bates (2000) used a nonlinear mixed effects modelling approach, in which they modelled the growth curves by a three parameter logistic function of age, given by y = φ1 1 + exp [−(x− φ2)/φ3] (16.11) where y is the trunk circumference, x is the tree age in days since December 31 1968, φ1…”
Density-dependent tree mortality in pinyon-juniper woodlands (2008, positive): “Mixed-effects models provide flexibility in modeling the within-group correlation often present in grouped data ( Pinheiro and Bates, 2000 ).”
Linear mixed-effects modeling approach to FMRI group analysis (2013, positive): “The degrees of freedom for the numerator and denominator of each F-statistic are also similarly determined (Pinheiro and Bates, 2000).”
Human perturbations reduce dung beetle diversity and dung removal ecosystem function (2021, methodology): “The relationships of abundance, species richness, and functional richness (i.e., number of functional groups, out of the nine defined above) with total dung removal (prediction 2) were evaluated with mixed- effects models (Pinheiro & Bates, 2000).”
Natural phenological variation in aspen (Populus tremula): the SwAsp collection (2008, positive): “For each trait analyzed, the clonal best linear unbiased predictors (BLUPs) and variance components were estimated using restricted maximum likelihood (REML) techniques with either the lme or lmer function in R ( Pinheiro and Bates 2000 ).”