Preparation of reduced representation bisulfite sequencing libraries for genome-scale DNA methylation profiling
By H. Gu, Zachary D. Smith, Christoph Bock, Patrick J Boyle, Andreas Gnirke, Alexander Meissner. Nature Protocols, 2011
694 citations recorded by the source corpus.
Subfields: Molecular Biology
View Paper: https://www.semanticscholar.org/paper/111a67180b99338ce55492d908baeb1012051d30
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Citations in the corpus
- Climate Change Impacts on Seagrass Meadows and Macroalgal Forests: An Integrative Perspective on Acclimation and Adaptation Potential (2018, methodology): “While whole genome bisulfite sequencing is still expensive for large sample sizes, reduced representation techniques, such as RRBS (Gu et al., 2011), bsRADseq (Trucchi et al., 2016), and epiGBS (van Gurp et al., 2016) allow for cost-effective population epigenetic comparisons, partly without the…”
- Epigenomic profiling of young and aged HSCs reveals concerted changes during aging that reinforce self-renewal (2014, methodology): “After determining the optimized PCR cycle number for each samples, a large-scale PCR reaction (100 ml) was performed (Gu et al., 2011).”
- Comparison of Next-Generation Sequencing Systems (2012, methodology): “Chung presented a whole methylome sequencing to study the difference between two kinds of bisulfite conversion methods (in solution versus in gel) by SOLiD platform [35].”
- Linking epigenetics and biological conservation: Towards a conservation epigenetics perspective (2019, positive): “…sequencing (Masser, Stanford, & Freeman, 2015) and reduced representation technologies (such as reduced representation bisulphite sequencing (RRBS; Gu et al., 2011) and bisulphite-converted restriction site-associated DNA sequencing (bsRADseq; Trucchi et al., 2016)) presented more cost-efficient…”
- SDH mutations establish a hypermethylator phenotype in paraganglioma. (2013, methodology): “Reduced Representation Bisulphite Sequencing Analysis of Mouse Chromaffin Cells RRBS was performed by Integragen SA (Evry, France), as described elsewhere (Gu et al., 2011; Smallwood and Kelsey, 2012).”