Ab initio solution of macromolecular crystal structures without direct methods

By A. McCoy, R. Oeffner, A. Wrobel, Juha R. M. Ojala, K. Tryggvason, B. Lohkamp, Randy J. Read. 2017

45 citations recorded by the source corpus.

Subfields: Materials Chemistry, Molecular Biology, Physical and Theoretical Chemistry, Computational Biology & Bioinformatics

How researchers see this paper

The researchers whose trusted networks rank it highest, strongest advocate first. Every researcher gets a different order.

In Materials Chemistry

1. Randy J. Read
2. M. Sammito
3. T. Croll
4. Andriy Kryshtafovych
5. R. Oeffner
6. Pavel V. Afonine
7. A. McCoy
8. I. Usón

In Molecular Biology

1. Randy J. Read
2. M. Sammito
3. Andriy Kryshtafovych
4. T. Croll
5. A. McCoy
6. R. Oeffner
7. Pavel V. Afonine
8. I. Usón

In Physical and Theoretical Chemistry

1. Randy J. Read
2. M. Sammito
3. T. Croll
4. Andriy Kryshtafovych
5. A. McCoy
6. Pavel V. Afonine

In Computational Biology & Bioinformatics

1. Randy J. Read
2. T. Croll
3. M. Sammito
4. Andriy Kryshtafovych
5. Pavel V. Afonine
6. A. McCoy
7. R. Oeffner
8. Yang Zhang

Citations in the corpus

• On the application of the expected log-likelihood gain to decision making in molecular replacement (2018, methodology): “This reasoning is consistent with the results of database studies (Oeffner et al., 2013; McCoy et al., 2017), where a correct solution is equivalently indicated by a TFZ of 8 and an LLGI of 82 ( 60) in nonpolar space groups, a TFZ value that has long been associated with indicating a correct…”
• Evaluation of template-based modeling in CASP13 (2019, background): “Nonetheless, a new understanding of the LLG score allows us to predict whether a full search would have succeeded, as searches that yield an increase in the LLG score of 60 units or more are almost always successful.(32) Since CASP7, it has become much more common for predictors to submit local erro”