Ezgi Karaca
Molecular Biology · 2012–2024
A researcher in the Science corpus: 6 papers; trusts 19 researchers and is trusted by 2 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 92 citations into it; #12,709 of 17,773 by trust here, #6,960 by citations
- Materials Chemistry — 55 citations into it; #11,449 of 11,513 by trust here, #6,473 by citations
- Computational Biology & Bioinformatics — 42 citations into it
- Computational Theory and Mathematics — 24 citations into it
- Spectroscopy — 8 citations into it
- Computational Chemistry & Drug Discovery — 7 citations into it
Whom Ezgi Karaca trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
- Marc F. Lensink
- Joël Janin
- A. W. Sousa da Silva
- Johannes Söding
- Alexandre M. J. J. Bonvin
- Aleix Lafita
- Ivan V. Anishchenko
Who trusts Ezgi Karaca overall
Papers from Ezgi Karaca's perspective
Ordered by how strongly the researchers Ezgi Karaca trusts endorse each paper. Same corpus, a different order for every researcher.
- TM-align: a protein structure alignment algorithm based on the TM-score
- Docking and scoring protein complexes: CAPRI 3rd Edition
- Optimization of affinity, specificity and function of designed influenza inhibitors using deep sequencing
- Robust, high-throughput solution structural analyses by small angle X-ray scattering (SAXS) (Nature Methods)
- Highly accurate protein structure prediction with AlphaFold
- Identification of direct residue contacts in protein–protein interaction by message passing
- CAPRI: A Critical Assessment of PRedicted Interactions (Proteins: Structure, Function, and Bioinformatics)
- Biological Crystallography Experimental Phasing with Shelxc/d/e: Combining Chain Tracing with Density Modification
- lDDT: a local superposition-free score for comparing protein structures and models using distance difference tests
- Critical assessment of methods of protein structure prediction (CASP) — round x
Their papers
- Prediction of homo- and hetero-protein complexes by protein docking and template-based modeling: a CASP-CAPRI experiment (2016) — 130 citations
- Assessment of the CASP14 Assembly Predictions (2021) — 39 citations
- Clustering biomolecular complexes by residue contacts similarity (2012) — 123 citations
- The HADDOCK2.2 Web Server: User-Friendly Integrative Modeling of Biomolecular Complexes. (2016) — 2,479 citations
- The HADDOCK2.4 web server for integrative modeling of biomolecular complexes (2024) — 478 citations
- Information-driven structural modelling of protein-protein interactions. (2015) — 13 citations