Yumiko Adachi
Molecular Biology · 2014–2017
A researcher in the Science corpus: 3 papers; trusts 3 researchers and is trusted by 0 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 49 citations into it
- Materials Chemistry — 22 citations into it
Whom Yumiko Adachi trusts
Their strongest outbound trust, strongest first, inferred from their citations.
- David Baker (in Molecular Biology)
- Roland L. Dunbrack (in Molecular Biology)
- Rhiju Das (in Molecular Biology)
Papers from Yumiko Adachi's perspective
Ordered by how strongly the researchers Yumiko Adachi trusts endorse each paper. Same corpus, a different order for every researcher.
- Alternate states of proteins revealed by detailed energy landscape mapping
- Cyclic coordinate descent: A robotics algorithm for protein loop closure
- Rosetta3: An Object-Oriented Software Suite for the Simulation and Design of Macromolecules
- The Rosetta all-atom energy function for macromolecular modeling and design
- Canonical structures for the hypervariable regions of immunoglobulins.
- OptCDR: a general computational method for the design of antibody complementarity determining regions for targeted epitope binding.
- Macromolecular modeling with rosetta.
- Backrub-like backbone simulation recapitulates natural protein conformational variability and improves mutant side-chain prediction.
- Sub-angstrom accuracy in protein loop reconstruction by robotics-inspired conformational sampling
- Computational design of antibody-affinity improvement beyond in vivo maturation (Nature Biotechnology)
Their papers
- RosettaAntibodyDesign (RAbD): A general framework for computational antibody design (2017) — 233 citations
- Priming a broadly neutralizing antibody response to HIV-1 using a germline-targeting immunogen (2015) — 409 citations
- Proof of principle for epitope-focused vaccine design (2014) — 544 citations