Eugénio C. Ferreira
BMC Systems Biology · 2002–2010
A researcher in the Science corpus: 3 papers; trusts 2 researchers and is trusted by 0 researchers here, as inferred from the citation graph.
Whom Eugénio C. Ferreira trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
Papers from Eugénio C. Ferreira's perspective
Ordered by how strongly the researchers Eugénio C. Ferreira trusts endorse each paper. Same corpus, a different order for every researcher.
- A general definition of metabolic pathways useful for systematic organization and analysis of complex metabolic networks (Nature Biotechnology)
- An expanded genome-scale model of Escherichia coli K-12 (iJR904 GSM/GPR) (Genome Biology)
- Escherichia coli K-12 undergoes adaptive evolution to achieve in silico predicted optimal growth (Nature)
- KEGG: Kyoto Encyclopedia of Genes and Genomes (Nucleic Acids Res.)
- Cytoscape: a software environment for integrated models of biomolecular interaction networks.
- Quantitative prediction of cellular metabolism with constraint-based models: the COBRA Toolbox v2.0 (Nature Protocols)
- BioModels Database: a free, centralized database of curated, published, quantitative kinetic models of biochemical and cellular systems (Nucleic Acids Res.)
- Optknock: A bilevel programming framework for identifying gene knockout strategies for microbial strain optimization (Biotechnology and Bioengineering)
- Regulatory on/off minimization of metabolic flux changes after genetic perturbations. (Proceedings of the National Academy of Sciences of the United States of America)
- Using process diagrams for the graphical representation of biological networks (Nature Biotechnology)
Their papers
- OptFlux: an open-source software platform for in silico metabolic engineering (2010) — 407 citations
- Air pollution control with semi-infinite programming (2009) — 52 citations
- Stability, dynamics of convergence and tuning of observer-based kinetics estimators (2002) — 57 citations