Ambrish Roy
Molecular Biology · 2010–2014
A researcher in the Science corpus: 7 papers; trusts 42 researchers and is trusted by 53 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 140 citations into it; #469 of 17,773 by trust here, #2,814 by citations
- Materials Chemistry — 85 citations into it; #2,078 of 11,513 by trust here, #7,007 by citations
- Computational Biology & Bioinformatics — 50 citations into it; #290 of 660 by trust here, #368 by citations
- Computational Theory and Mathematics — 35 citations into it; #1,453 of 12,182 by trust here, #1,700 by citations
- Spectroscopy — 10 citations into it
Whom Ambrish Roy trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
- Yang Zhang
- Jeffrey Skolnick
- Sitao Wu
- S. Parasuraman
- David C. Jones
- John Moult
- John A. Capra
- Michal Brylinski
- Tobias Schmidt
- Craig T. Porter
Who trusts Ambrish Roy overall
- Jianyi Yang
- Yang Zhang
- Robin Pearce
- Chengxin Zhang
- Qi Wu
- Fei Liu
- Wei Zheng
- Xiaogen Zhou
- András Szilágyi
- Lukás Jendele
Papers from Ambrish Roy's perspective
Ordered by how strongly the researchers Ambrish Roy trusts endorse each paper. Same corpus, a different order for every researcher.
- The Protein Data Bank.
- Basic local alignment search tool.
- TM-align: a protein structure alignment algorithm based on the TM-score
- Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.
- Comparative protein modelling by satisfaction of spatial restraints.
- A threading-based method (FINDSITE) for ligand-binding site prediction and functional annotation
- Automated server predictions in CASP7
- FUGUE: sequence-structure homology recognition using environment-specific substitution tables and structure-dependent gap penalties. (Journal of Molecular Biology)
- Hidden Markov models for detecting remote protein homologies
- Amino acid substitution matrices from protein blocks.
Their papers
- Automated protein structure modeling in CASP9 by I-TASSER pipeline combined with QUARK-based ab initio folding and FG-MD-based structure refinement (2011) — 161 citations
- BioLiP: a semi-manually curated database for biologically relevant ligand–protein interactions (2012) — 733 citations
- The I-TASSER Suite: protein structure and function prediction (2014) — 5,315 citations
- COFACTOR: an accurate comparative algorithm for structure-based protein function annotation (2012) — 696 citations
- Protein-ligand binding site recognition using complementary binding-specific substructure comparison and sequence profile alignment (2013) — 942 citations
- Recognizing protein-ligand binding sites by global structural alignment and local geometry refinement (2012) — 115 citations
- I-TASSER: a unified platform for automated protein structure and function prediction (2010) — 494 citations