Tomasz Zok
Molecular Biology · 2013–2023
A researcher in the Science corpus: 6 papers; trusts 9 researchers and is trusted by 0 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 121 citations into it
- Materials Chemistry — 45 citations into it
- Computational Biology & Bioinformatics — 34 citations into it
Whom Tomasz Zok trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
- Adam T. Zemla
- Nicholas I. Fisher
- Pawel Daniluk
- Angel R. Ortiz
- José Almeida Cruz
- Bogdan Lesyng
- Andreas Prlic
- Charles E.M. Strauss
- John Moult
- Marc-André Parisien
Who trusts Tomasz Zok overall
Papers from Tomasz Zok's perspective
Ordered by how strongly the researchers Tomasz Zok trusts endorse each paper. Same corpus, a different order for every researcher.
- LGA: a method for finding 3D similarities in protein structures
- Geometric nomenclature and classification of RNA base pairs.
- Protein data bank
- New metrics for comparing and assessing discrepancies between RNA 3D structures and models.
- ModeRNA: a tool for comparative modeling of RNA 3D structure
- The MC-Fold and MC-Sym pipeline infers RNA structure from sequence data
- Quantitative analysis of nucleic acid three-dimensional structures.
- Rfam: updates to the RNA families database (Nucleic Acids Res.)
- RNAstructure: software for RNA secondary structure prediction and analysis (BMC Bioinformatics)
- Biological Crystallography Experimental Phasing with Shelxc/d/e: Combining Chain Tracing with Density Modification
Their papers
- RNA-Puzzles toolkit: a computational resource of RNA 3D structure benchmark datasets, structure manipulation, and evaluation tools (2019) — 76 citations
- RNA-Puzzles Round II: assessment of RNA structure prediction programs applied to three large RNA structures (2015) — 197 citations
- RNA-Puzzles Round IV: 3D structure predictions of four ribozymes and two aptamers (2020) — 141 citations
- MCQ4Structures to compute similarity of molecule structures (2013) — 43 citations
- RNA-Puzzles Round III: 3D RNA structure prediction of five riboswitches and one ribozyme (2017) — 197 citations
- New prediction categories in CASP15 (2023) — 53 citations