Lude Franke
Molecular Biology · 2006–2019
A researcher in the Science corpus: 15 papers; trusts 6 researchers and is trusted by 2 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 253 citations into it; #13,709 of 17,773 by trust here, #2,641 by citations
- Artificial Intelligence — 8 citations into it
Whom Lude Franke trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
- Zemin Ning
- Minoru Kanehisa
- Katia Basso
- Homin K. Lee
- Adam A. Margolin
- Patrik D'haeseleer
- Anthony J. Cox
- Gerd Kempermann
- Ulrich Stelzl
Who trusts Lude Franke overall
Papers from Lude Franke's perspective
Ordered by how strongly the researchers Lude Franke trusts endorse each paper. Same corpus, a different order for every researcher.
- Using Bayesian Networks to Analyze Expression Data (Annual International Conference on Research in Computational Molecular Biology)
- A scaling normalization method for differential expression analysis of RNA-seq data (Genome Biology)
- RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome (BMC Bioinformatics)
- Potential etiologic and functional implications of genome-wide association loci for human diseases and traits (Proceedings of the National Academy of Sciences of the United States of America)
- A gene atlas of the mouse and human protein-encoding transcriptomes. (Proceedings of the National Academy of Sciences of the United States of America)
- Droplet barcoding for single cell transcriptomics applied to embryonic stem cells (Cell)
- Computational discovery of gene modules and regulatory networks (Nature Biotechnology)
- Computational and analytical challenges in single-cell transcriptomics (Nature reviews genetics)
- Singular value decomposition for genome-wide expression data processing and modeling. (Proceedings of the National Academy of Sciences of the United States of America)
- A General Framework for Weighted Gene Co-Expression Network Analysis (Statistical Applications in Genetics and Molecular Biology)
Their papers
- Reconstruction of a functional human gene network, with an application for prioritizing positional candidate genes. (2006) — 527 citations
- Gene co-expression analysis for functional classification and gene–disease predictions (2017) — 923 citations
- Population-based metagenomics analysis reveals markers for gut microbiome composition and diversity (2016) — 1,701 citations
- Proton pump inhibitors affect the gut microbiome (2015) — 1,218 citations
- Epigenome-wide association study of body mass index, and the adverse outcomes of adiposity (2016) — 815 citations
- Causal relationships between gut microbiome, short-chain fatty acids and metabolic diseases (2019) — 1,283 citations
- The effect of host genetics on the gut microbiome (2016) — 767 citations
- Meta-analysis identifies 29 additional ulcerative colitis risk loci, increasing the number of confirmed associations to 47 (2011) — 1,319 citations
- GAVIN: Gene-Aware Variant INterpretation for medical sequencing (2017) — 61 citations
- The Gut Microbiome Contributes to a Substantial Proportion of the Variation in Blood Lipids (2015) — 629 citations
- The Interplay of Host Genetics and the Gut Microbiota Underlying the Onset and Clinical Presentation of Inflammatory Bowel Disease (2016) — 719 citations
- Association analyses identify 38 susceptibility loci for inflammatory bowel disease and highlight shared genetic risk across populations (2015) — 2,354 citations
- Multiple common variants for celiac disease influencing immune gene expression (2010) — 1,085 citations
- Novel celiac disease genetic determinants related to the immune response (2008) — 702 citations
- A genome-wide association study for celiac disease identifies risk variants in the region harboring IL2 and IL21 (2007) — 704 citations