Martin J. Aryee
Molecular Biology · 2009–2019
A researcher in the Science corpus: 13 papers; trusts 10 researchers and is trusted by 6 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 235 citations into it; #7,853 of 17,773 by trust here, #1,460 by citations
- Genetics — 38 citations into it
Whom Martin J. Aryee trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
- Andrew P. Feinberg
- Vardhman K. Rakyan
- Alan Agresti
- Valentine Svensson
- Rafael A. Irizarry
- Benjamin M. Bolstad
- Leland McInnes
- Christoph Hafemeister
Who trusts Martin J. Aryee overall
- Andrew E. Jaffe
- Jean-Philippe Fortin
- Timothy Triche
- Wanding Zhou
- Charles E. Breeze
- Rafael A. Irizarry
- Steve Horvath
- Christoph Hafemeister
- Dmitry Kobak
Papers from Martin J. Aryee's perspective
Ordered by how strongly the researchers Martin J. Aryee trusts endorse each paper. Same corpus, a different order for every researcher.
- Highly parallel genome-wide expression profiling of individual cells using nanoliter droplets
- MAST: a flexible statistical framework for assessing transcriptional changes and characterizing heterogeneity in single-cell RNA sequencing data (Genome Biology)
- Droplet barcoding for single cell transcriptomics applied to embryonic stem cells (Cell)
- Exploration, normalization, and summaries of high density oligonucleotide array probe level data. (Biostatistics)
- UMAP: Uniform Manifold Approximation and Projection for Dimension Reduction
- Validation of noise models for single-cell transcriptomics (Nature Methods)
- A general and flexible method for signal extraction from single-cell RNA-seq data (Nature Communications)
- Single-cell mRNA quantification and differential analysis with Census (Nature Methods)
- Accounting for technical noise in single-cell RNA-seq experiments (Nature Methods)
- Quantitative single-cell RNA-seq with unique molecular identifiers (Nature Methods)
Their papers
- GUIDE-Seq enables genome-wide profiling of off-target cleavage by CRISPR-Cas nucleases (2014) — 2,123 citations
- Differential methylation of tissue- and cancer-specific CpG island shores distinguishes human induced pluripotent stem cells, embryonic stem cells and fibroblasts (2009) — 1,195 citations
- Dimeric CRISPR RNA-guided FokI nucleases for highly specific genome editing (2014) — 971 citations
- Engineered CRISPR-Cas9 nucleases with altered PAM specificities (2015) — 1,453 citations
- Feature selection and dimension reduction for single-cell RNA-Seq based on a multinomial model (2019) — 457 citations
- Minfi: a flexible and comprehensive Bioconductor package for the analysis of Infinium DNA methylation microarrays (2014) — 3,850 citations
- Epigenetic memory in induced pluripotent stem cells (2010) — 2,357 citations
- A comprehensive methylome map of lineage commitment from hematopoietic progenitors (2010) — 649 citations
- Genome-wide specificities of CRISPR-Cas Cpf1 nucleases in human cells (2016) — 645 citations
- Epigenome-wide association data implicate DNA methylation as an intermediary of genetic risk in Rheumatoid Arthritis (2013) — 932 citations
- Droplet-based combinatorial indexing for massive-scale single-cell chromatin accessibility (2019) — 392 citations
- Androgen-induced TOP2B mediated double strand breaks and prostate cancer gene rearrangements (2010) — 594 citations
- Global Causes of Diarrheal Disease Mortality in Children <5 Years of Age: A Systematic Review (2013) — 654 citations