Piotr Rotkiewicz

Computational Biology & Bioinformatics · 1999–2015

A researcher in the Science corpus: 4 papers; trusts 2 researchers and is trusted by 17 researchers here, as inferred from the citation graph.

Subfields

• Computational Biology & Bioinformatics — 14 citations into it
• Molecular Biology — 9 citations into it; #2,746 of 17,773 by trust here, #10,047 by citations

Whom Piotr Rotkiewicz trusts overall

Their strongest outbound trust, strongest first, inferred from their citations.

1. W. Kabsch
2. Christopher Sander

Who trusts Piotr Rotkiewicz overall

1. Dong Xu
2. Yang Zhang
3. Debswapna Bhattacharya
4. Shaun M. Kandathil
5. Joanna I. Sulkowska
6. Lawrence A. Kelley
7. Inigo Barrio Hernandez
8. Michel van Kempen
9. Renzhi Cao
10. D. Liebschner

Papers from Piotr Rotkiewicz's perspective

Ordered by how strongly the researchers Piotr Rotkiewicz trusts endorse each paper. Same corpus, a different order for every researcher.

1. Protein structure comparison by alignment of distance matrices.
2. Dictionary of protein secondary structure: Pattern recognition of hydrogen‐bonded and geometrical features
3. Basic local alignment search tool.
4. BLAST+: architecture and applications
5. BioLiP: a semi-manually curated database for biologically relevant ligand–protein interactions
6. Nativelike topology assembly of small proteins using predicted restraints in Monte Carlo folding simulations.
7. The Protein Data Bank.
8. Highly accurate protein structure prediction with AlphaFold
9. Amino acid substitution matrices from protein blocks.
10. Hidden Markov models for detecting remote protein homologies

Their papers

• Fast procedure for reconstruction of full-atom protein models from reduced representations (2008) — 389 citations
• Protein fragment reconstruction using various modeling techniques (2003) — 95 citations
• PDBFlex: exploring flexibility in protein structures (2015) — 85 citations
• Ab initio folding of proteins using restraints derived from evolutionary information (1999)