Frank Moller Aarestrup
Molecular Biology · 2001–2022
A researcher in the Science corpus: 17 papers; trusts 13 researchers and is trusted by 5 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 87 citations into it; #11,453 of 17,773 by trust here, #8,280 by citations
- Molecular Medicine — 24 citations into it; #119 of 296 by trust here, #101 by citations
- Genetics — 22 citations into it
- Clinical Biochemistry — 15 citations into it; #88 of 177 by trust here, #65 by citations
- Plant Science — 12 citations into it
- Artificial Intelligence — 11 citations into it
- Epidemiology — 11 citations into it; #2,143 of 2,148 by trust here, #1,722 by citations
- Computational Biology & Bioinformatics — 6 citations into it
Whom Frank Moller Aarestrup trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
- Heng Li
- Weizhong Li
- Daniel R. Zerbino
- R. Kaas
- Michael Inouye
- Rob Patro
- Robert C. Edgar
- Marcel Martin
- Nils Homer
Who trusts Frank Moller Aarestrup overall
Papers from Frank Moller Aarestrup's perspective
Ordered by how strongly the researchers Frank Moller Aarestrup trusts endorse each paper. Same corpus, a different order for every researcher.
- The Pfam protein families database
- Velvet: algorithms for de novo short read assembly using de Bruijn graphs.
- Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.
- BLAT--the BLAST-like alignment tool. (Genome Research)
- The Sequence Alignment/Map format and SAMtools (Bioinform.)
- BLAST+: architecture and applications
- Multilocus Sequence Typing of Total-Genome-Sequenced Bacteria (Journal of Clinical Microbiology)
- Salmon: fast and bias-aware quantification of transcript expression using dual-phase inference
- The TIGRFAMs database of protein families (Nucleic Acids Res.)
- MUSCLE: multiple sequence alignment with high accuracy and high throughput.
Their papers
- Multilocus Sequence Typing of Total-Genome-Sequenced Bacteria (2012) — 2,085 citations
- Staphylococcus aureus CC398: Host Adaptation and Emergence of Methicillin Resistance in Livestock (2012) — 869 citations
- Solving the Problem of Comparing Whole Bacterial Genomes across Different Sequencing Platforms (2014) — 823 citations
- Rapid and precise alignment of raw reads against redundant databases with KMA (2018) — 763 citations
- Benchmarking of Methods for Genomic Taxonomy (2014) — 344 citations
- ResFinder – an open online resource for identification of antimicrobial resistance genes in next-generation sequencing data and prediction of phenotypes from genotypes (2022) — 631 citations
- Detection of mobile genetic elements associated with antibiotic resistance in Salmonella enterica using a newly developed web tool: MobileElementFinder (2020) — 609 citations
- ResFinder 4.0 for predictions of phenotypes from genotypes (2020) — 2,844 citations
- Global monitoring of antimicrobial resistance based on metagenomics analyses of urban sewage (2019) — 937 citations
- Using Genomics to Track Global Antimicrobial Resistance (2019) — 329 citations
- PointFinder: a novel web tool for WGS-based detection of antimicrobial resistance associated with chromosomal point mutations in bacterial pathogens (2017) — 674 citations
- Rapid and Easy In Silico Serotyping of Escherichia coli Isolates by Use of Whole-Genome Sequencing Data (2015) — 796 citations
- Real-Time Whole-Genome Sequencing for Routine Typing, Surveillance, and Outbreak Detection of Verotoxigenic Escherichia coli (2014) — 1,272 citations
- Identification of acquired antimicrobial resistance genes (2012) — 4,685 citations
- Global Monitoring of Salmonella Serovar Distribution from the World Health Organization Global Foodborne Infections Network Country Data Bank: Results of Quality Assured Laboratories from 2001 to 2007 (2011) — 670 citations
- Quinolone and macrolide resistance in Campylobacter jejuni and C. coli: resistance mechanisms and trends in human isolates. (2001) — 742 citations
- Effect of Abolishment of the Use of Antimicrobial Agents for Growth Promotion on Occurrence of Antimicrobial Resistance in Fecal Enterococci from Food Animals in Denmark (2001) — 626 citations