Simple sequence repeats as useful resources to study transcribed genes of cotton

By S. Saha, M. Karaca, Johnie N. Jenkins Jr., A. Zipf, O. Reddy, R. Kantety. Euphytica, 2003

90 citations recorded by the source corpus.

Subfields: Endocrinology, Plant Science

View Paper: https://www.semanticscholar.org/paper/f7d4ec198b03e00e29376416f54c8797c3064812

How researchers see this paper

The researchers whose trusted networks rank it highest, strongest advocate first. Every researcher gets a different order.

In Plant Science

1. Rajeev K. Varshney
2. K. Semagn
3. A. Graner
4. A. Börner
5. R. Aggarwal
6. T. Mahendar
7. Å. Bjornstad
8. M. Sorrells

Citations in the corpus

• QTL mapping for economic traits based on a dense genetic map of cotton with PCR-based markers using the interspecific cross of Gossypium hirsutum × Gossypium barbadense (2006, background): “7% in the sequences of dicots (Saha et al. 2003) and dense consensus maps including a number of EST-based markers become fundamental tools for comparing linkage groups (LGs) and QTLs derived from different pedigrees; and (4) PCR-based codominant DNA markers were simple, informative, and prompt.”
• Genic microsatellite markers in plants: features and applications. (2005, background): “For example, ESTs have been scanned for the presence of SSRs in Arabidopsis [16], cotton [17,18], Festuca species [19] ,g rapes[9], Medicago species [20] ,s oybean[21] ,s ugarcane[22], spruce [23] and cereals including barley [11‐13,17,24], maize [13,16,21,24], rice [10,13,16,17,24], rye [13,15,25],”
• An overview of molecular marker methods for plants (2006, background): “…primarily on monocotyledonous crops (Kantety et al., 2002; Thiel et al., 2003; Varshney et al., 2002), although ESTs of a few dicot species have been explored for SSR mining (Eujayl et al. 2004; Morgante et al. 2002; Qureshi et al. 2004; Saha et al. 2003; Scott et al., 2000; Varshney et al., 2005).”
• MOLECULAR BIOLOGY AND PHYSIOLOGY EST-SSR: A New Class of Genetic Markers in Cotton (2004, background): “Reddy et al. (2001) reported that about 13% of genomic JESPR SSR sequences from cotton were similar to sequences in the Arabidopsis genome and is consistent with the finding that many of the genomic SSRs were derived from expressed portion of the genome (Saha et al., 2003).”
• Genic Molecular Markers in Plants: Development and Applications (2007, background): “Cotton (Gossypium hirsutum) EST-SSR Cotton species Saha et al. 2003 Sunflower (Helianthus annus) EST-SSR Heliantus angustifolius, Helianthus verticillatus Pashley et al. 2006”