Introducing the bipartite Package: Analysing Ecological Networks

By Carsten F. Dormann, Bernd Gruber, Jochen Fründ. 2008

1,752 citations recorded by the source corpus.

View Paper: https://www.semanticscholar.org/paper/f23d90643ae91bd7f33650a69069b0221ca13b30

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Citations in the corpus

• Morphological and Spatio‐Temporal Mismatches Shape a Neotropical Savanna Plant‐Hummingbird Network (2014, methodology): “The observed H20 value was contrasted to 10,000 randomized networks to assess its significance, using the null models generated by functions r2dtable and vaznull in R-package bipartite (Dormann et al. 2008).”
• The ‘night shift’: nocturnal pollen‐transport networks in a boreal pine forest (2011, methodology): “If abundance and the degree of generalisation are not correlated, this could affect definitions of network indices in which the use of resources are considered relative to their availability (Vázquez, 2005; Dormann et al., 2009). The percentage of individual moths with pollen on their bodies was low”
• How to be a specialist? Quantifying specialisation in pollination networks (2011, methodology): “All indices can be calculated using the function “species level” in the R-package bipartite (Dormann et al., 2009, Dormann et al., 2008).”
• Temporal variation in plant–pollinator networks from seasonal tropical environments: Higher specialization when resources are scarce (2018, methodology): “We calculated weighted modularity using the QuanBiMo algorithm (Dormann & Strauss, 2014).”
• Defining invasiveness and invasibility in ecological networks (2016, unknown): “05 (Dormann et al. 2008).”
• Revealing secret liaisons: DNA barcoding changes our understanding of food webs (2010, methodology): “Quantitative food web structure Quantitative food webs were constructed using the Bipartite package of R (Dormann et al., 2008, 2009).”
• Improved community detection in weighted bipartite networks (2016, methodology): “It is a C++ routine that is available in the R package bipartite [16] through the function computeModules.”
• Plant-hummingbird interaction networks in urban areas: Generalization and the importance of trees with specialized flowers as a nectar resource for pollinator conservation (2019, methodology): “For centrality measures bc and cc , we calculated the quantitative extensions available in bipartite (Dormann et al., 2008).”