Phylogenetics of amaranthaceae based on matK/trnK sequence data-evidence from parsimony, likelihood, and bayesian analyses

By Kai F. Müller, Thomas Borsch. 2005

157 citations recorded by the source corpus.

View Paper: https://www.semanticscholar.org/paper/f133de635cf1783c956b5e0f1f0f008fc8ceaf08

How researchers see this paper

The researchers whose trusted networks rank it highest, strongest advocate first. Every researcher gets a different order.

Citations in the corpus

Diversification of the Old World Salsoleae s.l. (Chenopodiaceae): Molecular Phylogenetic Analysis of Nuclear and Chloroplast Data Sets and a Revised Classification (2007, background): “…with other families have been explored by a number of researchers using morphological and molecular markers (Scott 1977a, 1977b, 1978; Cuénoud et al. 2002; Kadereit et al. 2003, 2006; Pratt 2003; Schütze et al. 2003; Müller and Borsch 2005; Shepherd et al. 2005; Kapralov et al. 2006).”
A novel phylogeny-based generic classification for Chenopodium sensu lato, and a tribal rearrangement of Chenopodioideae (Chenopodiaceae) (2012, methodology): “2003; müller & Borsch 2005). the incremented taxon sampling of Chenopodium s.lat. then allowed Fuentes-Bazan & al.”
Mutational dynamics and phylogenetic utility of noncoding chloroplast DNA (2009, background): “…confined to P8, mutational hotspots with a high degree of length mutations and independent extensions in the trnK group II intron are more evenly distributed across the domains/subdomains, and comprise fewer nucleotides (e.g., Müller and Borsch 2005a; Hausner et al. 2006; own unpublished data).”
Phylogenetic Relationships in the Salicornioideae / Suaedoideae / Salsoloideae s.l. (Chenopodiaceae) Clade and a Clarification of the Phylogenetic Position of Bienertia and Alexandra Using Multiple DNA Sequence Datasets (2006, methodology): “Asch., Kadereit et al. (2003), R- AY270063; Camphorosma lessingii Litw., Uzbekistan, Bukhare region, Kyzyl-Kum station, Pyankov s.n. (no voucher), I- DQ499334, A- DQ499362, P- DQ499418, L- DQ499381, C. monspeliaca L., Müller & Borsch (2005), M- AY514829, Kadereit et al. (2003), R- AY270071; Panderi”
Disintegrating Portulacaceae: a new familial classification of the suborder Portulacineae (Caryophyllales) based on molecular and morphological data (2010, background): “…from previously published studies (Olmstead & al., 2000; Applequist & Wallace, 2001; Cuénoud & al., 2002; Nyffeler, 2002, 2007; Edwards & al., 2005; Müller & Borsch, 2005; Applequist & al., 2006) were obtained from GenBank (http://www.ncbi.nlm.nih.gov/) and seven matK sequences were newly…”
Molecular phylogeny of Camphorosmeae (Camphorosmoideae, Chenopodiaceae): Implications for biogeography, evolution of C4‐photosynthesis and taxonomy (2011, methodology): “Phylogenetic analyses of the Amaranthaceae/ Chenopodiaceae alliance using different molecular markers (Kadereit & al., 2003, rbcL; Pratt, 2003, ndhF; Müller & Borsch, 2005, matK-trnK region) have revealed that Camphorosmeae are monophyletic and closely related to subfam.”
Phylogeny of Nymphaea (Nymphaeaceae): Evidence from Substitutions and Microstructural Changes in the Chloroplast trnT‐trnF Region (2007, methodology): “Based on a character resampling approach, the trnT-trnF region was recently shown to comprise more phylogenetic structure per informative character than matK (Müller et al. 2006).”
A taxonomic backbone for the global synthesis of species diversity in the angiosperm order Caryophyllales (2015, methodology): “Palmer j. 1998: a taxonomic revision of Gomphrena (Amaranthaceae) in australia.”
Phylogeny of basal eudicots: Insights from non-coding and rapidly evolving DNA (2007, background): “…mutations in rapidly evolving spacers and introns can be expected to be of high phylogenetic utility (Kelchner 2000), as has been shown for indels supporting shallower nodes (Müller and Borsch 2005) as well as for indels in the conserved chloroplast-inverted repeat (Graham et al. 2000).”
Phylogenetic analysis of Nymphaeales using fast-evolving and noncoding chloroplast markers (2007, methodology): “…Society of London, Botanical Journal of the Linnean Society, 2007, 154, 141–163 1994; Johnson & Soltis, 1995; Hilu & Liang, 1997; Hilu et al., 2003; Müller & Borsch, 2005b), and for the trnT-trnF region (e.g. Taberlet et al., 1991; Asmussen & Chase, 2001; Borsch et al., 2003; Sauquet et al.,…”