Development of an algorithm identifying maximally diverse core collections

By J. Marita, Julie M. Rodriguez, J. Nienhuis. Genetic Resources and Crop Evolution, 2000

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Sampling Strategies for Conserving Maize Diversity When Forming Core Subsets Using Genetic Markers (2006, background): “These criteria are in agreement with Marita et al. (2000), who suggests that core subsets can be formed with the perception of maximizing the total diversity and thus ensuring the inclusion of restricted or rare alleles (taxonomists’ or geneticists’ perspective), or instead, by maximizing the repres”
Genotyping a large collection of pepper (Capsicum spp.) with SSR loci brings new evidence for the wild origin of cultivated C. annuum and the structuring of genetic diversity by human selection of cultivar types (2013, background): “…were developed to track the allelic variants associated to phenotypic variations directly within core collections of plant genotypes, i.e. subsamples of genotypes which represent the genetic diversity of the crop with a minimal redundancy (Marita et al. 2000; Gupta et al. 2005; Zhu et al. 2008).”
Genetic Assessment of a Mini‐Core Subset Developed from the USDA Rice Genebank (2009, methodology): “When using molecular markers to determine a germplasm collection for the retention of genetic diversity, the M (maximization) strategy or nested selection methods (Bataillon et al., 1996; Marita et al., 2002; Schoen and Brown, 1993) are applied to select specifi c combinations of accessions while ma”