Automated comparative protein structure modeling with SWISS‐MODEL and Swiss‐PdbViewer: A historical perspective
By Nicolas Guex, Manuel C. Peitsch, Torsten Schwede. 2009
2,044 citations recorded by the source corpus.
Subfields: Materials Chemistry, Molecular Biology
How researchers see this paper
The researchers whose trusted networks rank it highest, strongest advocate first. Every researcher gets a different order.
In Materials Chemistry
- Torsten Schwede
- Lorenza Bordoli
- Gabriel Studer
- J. Haas
- Florian Kiefer
- Andriy Kryshtafovych
- Andrej Sali
- Antoine Daina
In Molecular Biology
- Torsten Schwede
- Lorenza Bordoli
- Gabriel Studer
- Andriy Kryshtafovych
- Andrej Sali
- J. Haas
- Martino Bertoni
- Andrew M. Waterhouse
Citations in the corpus
- The Protein Model Portal—a comprehensive resource for protein structure and model information (2013, background): “Experimental structural biology and homology modeling thereby complement each other in the exploration of the protein structure space and as a result structural coverage to a large extent is now available for the proteomes of many model organisms such as Escherichia coli (7) or Thermotoga maritima (”
- The SIB Swiss Institute of Bioinformatics’ resources: focus on curated databases (2015, background): “The corresponding papers were the highest cited Swiss resource articles for several years (53,54) and paved the way for the development of these popular resources (55).”
- Computational modeling of membrane proteins (2014, methodology): “105 Homology modeling is a powerful tool for high sequence similarities between the target and the template, but it is not suitable for low ( (cid:2) 25”
- Automated Protein Structure Modeling with SWISS-MODEL Workspace and the Protein Model Portal (2012, methodology): “Since the first release of the SWISS-MODEL server, the resource has evolved to reflect advances of modeling algorithms as well as Internet and web-technologies (46).”
- Protein Modelling: What Happened to the “Protein Structure Gap”? (2013, positive): “…(aka homology or template-based modeling) of protein structures were developed two decades ago, which allow extrapolating the available experimental structure information to so far uncharacterized protein sequences (Guex et al., 2009; Peitsch, 1995; Sanchez and Sali, 1998; Sutcliffe et al., 1987).”
- OpenStructure: an integrated software framework for computational structural biology (2013, methodology): “For interactive work, we have developed a graphical user interface called DNG (DINO/DeepView Next Generation; Guex et al., 2009).”