heatmaply: an R package for creating interactive cluster heatmaps for online publishing
By Tal Galili, Alan O'Callaghan, Jonathan Sidi, Carson Sievert. 2017
515 citations recorded by the source corpus.
Abstract Summary heatmaply is an R package for easily creating interactive cluster heatmaps that can be shared online as a stand-alone HTML file. Interactivity includes a tooltip display of values when hovering over cells, as well as the ability to zoom in to specific sections of the figure from the data matrix, the side dendrograms, or annotated labels. Thanks to the synergistic relationship between heatmaply and other R packages, the user is empowered by a refined control over the statistical and visual aspects of the heatmap layout. Availability and implementation The heatmaply package is available under the GPL-2 Open Source license. It comes with a detailed vignette, and is freely available from: http://cran.r-project.org/package=heatmaply. Supplementary information Supplementary data are available at Bioinformatics online.
Subfields: Biophysics, Information Systems and Management, Molecular Biology
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Citations in the corpus
- Make Interactive Complex Heatmaps in R (2021, methodology): “There are also several R packages that implement interactive heatmaps such as d3heatmap (Cheng and Galili 2018), heatmaply (Galili, O’Callaghan, Sidi, and Sievert 2017) and iheatmapr (Schep and Kummerfeld 2017).”