Natural Assemblages of Marine Proteobacteria and Members of the Cytophaga-Flavobacter Cluster Consuming Low- and High-Molecular-Weight Dissolved Organic Matter

By Matthew T. Cottrell, David L. Kirchman. Applied and Environmental Microbiology, 2000

1,117 citations recorded by the source corpus.

Subfields: Ecology, Oceanography, Pollution

View Paper: https://www.semanticscholar.org/paper/dcb2f9db80e77d5c46f9e39428a0d2adf2246011

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Citations in the corpus

Microbial ecology of organic aggregates in aquatic ecosystems (2002, background): “…Microbial ecology of organic aggregates cent dyes and CLSM, or combining them with microautoradiography (Lee et al. 1999, Ouverney & Fuhrman 1999, Cottrell & Kirchman 2000) will result in new and exciting insights into the composition, the physiological activity and the spatial organization of…”
Effect of nutrient amendments on bacterioplankton production, community structure, and DOC utilization in the northwestern Sargasso Sea (2002, background): “Cottrell & Kirchman (2000) found that the consumption of specific dissolved organic compounds differed among various phylogenetic groups of bacterioplankton.”
Algae as an important environment for bacteria – phylogenetic relationships among new bacterial species isolated from algae (2013, background): “Proteobacteria and Bacteroidetes are common and in many cases dominant in aquatic environments (Cottrell & Kirchman 2000a, b; Biegala et al. 2002; Simonato et al. 2010); this is proportionally reflected in the discovery of new bacterial taxa from algal sources (together 77% of the 101 valid species…”
Ecology of marine Bacteroidetes: a comparative genomics approach (2013, background): “This fact is in agreement with the preference for polymers found in MAR-FISH studies (Cottrell and Kirchman 2000).”
Single-cell analysis of bacterial growth, cell size, and community structure in the Delaware estuary (2004, methodology): “…of polymeric compounds is not uniformly distributed among cultured bacteria (Martinez et al. 1996) and various types of uncultured bacteria in aquatic systems, including Proteobacteria and Cytophaga-like bacteria, appear to differ in the uptake of DOM compounds (Cottrell & Kirchman 2000).”
The carbohydrates of Phaeocystis and their degradation in the microbial food web (2007, background): “Members of the CF cluster are chemo-organotrophic, and known for their capacity to degrade complex carbohydrates such as pectin, cellulose and chitin (Reichenbach and Dworkin 1991; Cottrell and Kirchman 2000; Kirchman 2002).”
Strong linkages between DOM optical properties and main clades of aquatic bacteria (2016, background): “…preference for monomers), sister species have been shown to exhibit *Correspondence: calonso@cure.edu.uy Additional Supporting Information may be found in the online version of this article. dissimilar patterns of substrate utilization (Cottrell and Kirchman 2000; Alonso et al. 2009).”
DON as a source of bioavailable nitrogen for phytoplankton (2006, positive): “For example, Cottrell and Kirchman (2000) used microautoradiography and fluorescence in situ hybridization (MICRO FISH) to investigate which bacterial groups dominate uptake of a number of compounds including proteins and amino acids.”
Changes in bacterial activity and community structure in response to dissolved organic matter in the Hudson River, New York (2004, background): “Also, uptake of several DOM components differs among these 4 bacterial groups (Cottrell & Kirchman 2000, Malmstrom et al. 2004).”
Diversity of Bacteroidetes in high-altitude saline evaporitic basins in northern Chile (2009, background): “They are involved in the degradation of high molecular weight compounds such as cellulose, agar, and chitin in both dissolved and particulate fractions of marine organic matter [Abell and Bowman, 2005; Kirchman, 2002; Cottrell and Kirchman, 2000].”
Compositional changes in free‐living bacterial communities along a salinity gradient in two temperate estuaries (2002, background): “…nutrients have been hypothesized to drive the seasonal succession of the bacterial assemblages in the Baltic Sea (Pinhassi and Hagström 2000), and shifts in bacterial composition have been linked to changes in the nature of the dissolved organic mater (DOM) pool (Cottrell and Kirchman 2000a).”
Abundance and activity of major groups of prokaryotic plankton in the coastal North Sea during spring and summer (2006, background): “Members of the Bacteroidetes are chemo-organotrophic, known for their capacity to degrade complex carbohydrates such as pectin, cellulose and chitin (Reichenbach & Dworkin 1991, Cottrell & Kirchman 2000, Kirchman 2002).”