Detecting actively translated open reading frames in ribosome profiling data

By Lorenzo Calviello, Neelanjan Mukherjee, E. Wyler, Henrik Zauber, Antje Hirsekorn, Matthias Selbach, Markus Landthaler, Benedikt Obermayer, Uwe Ohler. Nature Methods, 2015

388 citations recorded by the source corpus.

Subfields: Cancer Research, Molecular Biology

View Paper: https://www.semanticscholar.org/paper/dba995d1f24d719f40e7cf1e33234608704c12e9

How researchers see this paper

The researchers whose trusted networks rank it highest, strongest advocate first. Every researcher gets a different order.

In Cancer Research

1. Samie R. Jaffrey
2. Chuan He

In Molecular Biology

1. S. Zaccara
2. Samie R. Jaffrey
3. Chuan He
4. P. He
5. Kate D. Meyer

Citations in the corpus

• A Unified Model for the Function of YTHDF Proteins in Regulating m6A-Modified mRNA (2020, methodology): “We used a standard protocol for determining ribosome-protected reads, which inherently discards any reads that derive from the siRNA itself because these fragments would be too short to be a ribosome-protected fragment, as described above (Calviello et al., 2015; McGlincy and Ingolia, 2017).”