OrganellarGenomeDRAW (OGDRAW) version 1.3.1: expanded toolkit for the graphical visualization of organellar genomes

By Stephan Greiner, Pascal Lehwark, Ralph Bock. bioRxiv, 2019

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OGDRAW has become the standard tool for displaying maps of organellar genomes it converts GenBank entries into graphical maps a new version with improved functionality has been released Abstract Organellar (plastid and mitochondrial) genomes play an important role in resolving phylogenetic relationships, and next-generation sequencing technologies have led to a burst in their availability. The ongoing massive sequencing efforts require software tools for routine assembly and annotation of organellar genomes as well as their display as physical maps. OrganellarGenomeDRAW (OGDRAW) has become the standard tool to draw graphical maps of plastid and mitochondrial genomes. Here were present a new version of OGDRAW equipped with a new front end. Besides several new features, OGDRAW has now access to a local copy of the organelle genome database of the NCBI RefSeq project. Together with batch processing of (multi-)GenBank files, this enables the user to easily visualize large sets of organellar genomes spanning entire taxonomic clades. The new OGDRAW server can be accessed at https://chlorobox.mpimp-golm.mpg.de/OGDraw.html.

Subfields: Genetics, Molecular Biology

View Paper: https://www.semanticscholar.org/paper/cd51fe058b337bfefe41f02ac61f2e293d426892

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