RADSeq: next-generation population genetics.

By J. Davey, Mark L. Blaxter. Briefings in Functional Genomics, 2010

764 citations recorded by the source corpus.

Subfields: Ecology, Genetics, Molecular Biology

View Paper: https://www.semanticscholar.org/paper/cc4392a5c12714abf4f67bc239706d09f03ecac0

How researchers see this paper

The researchers whose trusted networks rank it highest, strongest advocate first. Every researcher gets a different order.

In Ecology

1. A. Singh
2. B. Singh
3. A. Hoffmann
4. M. Byrne
5. L. Joseph
6. A. Weeks
7. C. Sgrò
8. Mark L. Blaxter

In Genetics

1. A. Singh
2. B. Singh
3. P. Fuentes-Utrilla
4. Timothee Cezard
5. Karim Gharbi
6. Cathlene Eland
7. J. C. Brooks
8. Niklaus J. Grünwald

In Molecular Biology

1. A. Singh
2. B. Singh
3. Karim Gharbi
4. Timothee Cezard
5. P. Fuentes-Utrilla
6. Cathlene Eland
7. Mark L. Blaxter
8. J. Davey

Citations in the corpus

• A framework for incorporating evolutionary genomics into biodiversity conservation and management (2015, background): “First, the recently developed reduced-representation sequencing (RRS), including genotyping-by-sequencing (GBS) and RADSeq [57-59] technologies, can overcome this problem by targeting a subset (approximately 1%) of the genome.”
• Novel R tools for analysis of genome-wide population genetic data with emphasis on clonality (2015, background): “With the advent of large-scale sequencing and reduced-representation libraries, it has become easier to sequence tens of thousands of markers from hundreds of individuals (Davey and Blaxter, 2010; Davey et al., 2011; Elshire et al., 2011).”
• Double Digest RADseq: An Inexpensive Method for De Novo SNP Discovery and Genotyping in Model and Non-Model Species (2012, positive): “We have developed a protocol that builds on the RADseq method [19] but which differs in two principal respects (Figure 2).”
• Special features of RAD Sequencing data: implications for genotyping (2012, methodology): “Restriction site-associated DNA sequencing (RAD-Seq; Miller et al. 2007; Baird et al. 2008; Davey & Blaxter 2011) is a method for SNP discovery and genotyping using sequencing-by-synthesis.”
• Marker-Assisted Plant Breeding: Principles and Practices (2015, methodology): “9) by adapting it to a NGS platform like Illumina Genome Analyzer (Baird et al. 2008; Davey and Blaxter 2010).”
• The importance of considering genetic diversity in shark and ray conservation policies (2017, neutral): “2009; Davey and Blaxter 2011; Rocha et al.”