BioXTAS RAW: improvements to a free open-source program for small-angle X-ray scattering data reduction and analysis

By Jesse Hopkins, Richard E. Gillilan, Søren T Skou. Journal of Applied Crystallography, 2017

497 citations recorded by the source corpus.

BioXTAS RAW is a graphical-user-interface-based free open-source Python program for reduction and analysis of small-angle X-ray solution scattering (SAXS) data, including size-exclusion chromatography coupled SAXS data. The software is designed for biological data and enables creation and plotting of one-dimensional scattering profiles from two-dimensional detector images, standard data operations such as averaging and subtraction and analysis of radius of gyration and molecular weight, and more advanced analyses such as calculation of inverse Fourier transforms.

Subfields: Materials Chemistry, Molecular Biology, Radiation

View Paper: https://www.semanticscholar.org/paper/cb9600b97f452b7426c9b79e821d63741e29fa5d

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Citations in the corpus

G3BP1 is a tunable switch that triggers phase separation to assemble stress granules (2020, unknown): “A composite protein-protein interaction (PPI) network was built by combining STRING (v10) (Szklarczyk et al., 2015), BioPlex (Huttlin et al., 2015), and InWeb (Hopkins et al., 2017), as well as three unbiased SG interactomes (Jain et al., 2016; Markmiller et al., 2018; Youn et al., 2018).”
Structural and biophysical properties of FopA, a major outer membrane protein of Francisella tularensis (2022, methodology): “MW estimation was repeated using two other alternate software: BioXTAS RAW (42) and denss.fit_data.py in DENSS software package (43).”
Comprehensive phylogenetic analysis of the ribonucleotide reductase family reveals an ancestral clade (2022, unknown): “Data processing at the beamline was performed in BioXTAS RAW ( Hopkins et al., 2017 ).”