Hypergraphs and Cellular Networks
By Steffen Klamt, Utz-Uwe Haus, Fabian J Theis. PLoS Comput. Biol., 2009
536 citations recorded by the source corpus.
3,41Max Planck Institute for Dynamics of Complex Technical Systems, Magdeburg, Germany, 2Institute for Mathematical Optimization, Faculty of Mathematics, Otto-von-Guericke University Magdeburg, Magdeburg, Germany, 3Institute for Bioinformatics and Systems Biology, Helmholtz Zentrum Mu¨nchen—German Research Center forEnvironmental Health, Neuherberg, Germany, 4Max Planck Institute for Dynamics and Self-Organization, Go¨ttingen, Germany
Subfields: Molecular Biology
View Paper: https://www.semanticscholar.org/paper/bcb6433a6b5b1ecd44b3f0f3381c96e7d97b4b03
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Citations in the corpus
- What are higher-order networks? (2021, background): “Reactions in biochemical systems often involve more than two species (A+B → C+D) [172], or two reagents might interact only in the presence of an enzyme.”
- Networks beyond pairwise interactions: structure and dynamics (2020, background): “[683] Steffen Klamt, Utz-Uwe Haus, and Fabian Theis.”
- BisoGenet: a new tool for gene network building, visualization and analysis (2010, background): “For an introduction on Hypergraphs and cellular networks see [13].”
- Nonequilibrium Thermodynamics of Chemical Reaction Networks: Wisdom from Stochastic Thermodynamics (2016, background): “The structure originating is rather a hyper-graph [56, 65], or equivalently a Petri net [66, 67].”
- Random Walks on Simplicial Complexes and the normalized Hodge Laplacian (2018, background): “For instance, biochemical reactions often involve more than two species in a reaction [77]; sensors record collections of interactions at a given time [42,56, 121]; people communicate in small groups with group chat messaging; and individuals form teams or exert peer pressure [25,75].”
- Recommender Systems (2012, background): “Hypergraph representation has already found applications in ferromagnetic dynamics [88,89], population stratification [90], cellular networks [91], academic team formation [92], and many other areas.”