Community Resources and Strategies for Association Mapping in Sorghum

By A. M. Casa, G. Pressoir, P. Brown, S. Mitchell, William L. Rooney, M. Tuinstra, C. Franks, Stephen Kresovich. 2008

374 citations recorded by the source corpus.

Subfields: Agronomy and Crop Science, Genetics

View Paper: https://www.semanticscholar.org/paper/b5f19d1da026d7baa205342fb945bbf5445eed65

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Citations in the corpus

Sweet Sorghum Genetic Diversity and Association Mapping for Brix and Height (2009, methodology): “In general, the SSR PCoA shows that the panels are structured very diff erently, the sweet sorghum panel has greater diversity from amber types, the panel of Casa et al. (2008) has much more diversity from durra and caudatum types.”
Status and Prospects of Association Mapping in Plants (2008, background): “Sorghum Diverse inbred lines 377 47 Community resource report (Casa et al., 2008)”
Population genomic and genome-wide association studies of agroclimatic traits in sorghum (2012, methodology): “Because the SAP includes a large fraction of converted lines, with large introgressions around height and maturity loci, the previous analysis does not reflect a typical GWAS case.”
Next-generation phenotyping: requirements and strategies for enhancing our understanding of genotype–phenotype relationships and its relevance to crop improvement (2013, background): “…that have developed these kinds of publicly shared germplasm resources include rice (Zhao et al. 2011a), maize (Yu et al. 2008), wheat (Neumann et al. 2011) Arabidopsis (Atwell et al. 2010), sorghum (Mitchell et al. 2008), barley (Pasam et al. 2012) and many other species (Zhu et al. 2008).”
Association Mapping for Grain Quality in a Diverse Sorghum Collection (2012, methodology): “Earlier ef orts to support phenotype-based racial classii cation in sorghum with genotypic data were successful (Aldrich and Doebley, 1992; Perumal et al., 2007; Folkertsma et al., 2005; Casa et al., 2008; Brown et al., 2011), but there is some disagreement between phenotype- and genotype-based raci”
Biological Nitrification Inhibition—A Novel Strategy to Regulate Nitrification in Agricultural Systems (2012, neutral): “Association mapping approaches could also be explored by evaluating the mini-core subset (10% of the core collection and 1% of the entire collection, which amounts to 242 accessions) of ICRISAT’s global sorghum germplasm collection, the recently developed reference germplasm set of 384 wild and cult”